Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Syne4Q8CII8 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Syne4Q8CII8 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Syne4Q8CII8 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Syne4Q8CII8 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Syne4Q8CII8 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Syne4Q8CII8 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Syne4Q8CII8 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Syne4Q8CII8 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC7.78□□□□□ -1.16
Syne4Q8CII8 Gm15149-201ENSMUST00000119370 360 ntBASIC7.78□□□□□ -1.16
Syne4Q8CII8 Gm7189-201ENSMUST00000119811 429 ntBASIC7.78□□□□□ -1.16
Syne4Q8CII8 Gm3810-201ENSMUST00000122413 476 ntBASIC7.78□□□□□ -1.16
Syne4Q8CII8 Gm23426-201ENSMUST00000122483 318 ntBASIC7.78□□□□□ -1.16
Syne4Q8CII8 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Syne4Q8CII8 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC7.78□□□□□ -1.16
Syne4Q8CII8 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Syne4Q8CII8 Gm26410-201ENSMUST00000157670 261 ntBASIC7.78□□□□□ -1.16
Syne4Q8CII8 Gm16557-201ENSMUST00000159182 191 ntBASIC7.78□□□□□ -1.16
Syne4Q8CII8 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Syne4Q8CII8 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Syne4Q8CII8 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
Syne4Q8CII8 Trbv27-201ENSMUST00000193711 277 ntBASIC7.78□□□□□ -1.16
Syne4Q8CII8 Gm20223-201ENSMUST00000199932 805 ntBASIC7.78□□□□□ -1.16
Syne4Q8CII8 Gm5055-201ENSMUST00000215697 581 ntBASIC7.78□□□□□ -1.16
Syne4Q8CII8 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC7.78□□□□□ -1.16
Syne4Q8CII8 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC7.78□□□□□ -1.16
Syne4Q8CII8 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC7.78□□□□□ -1.16
Syne4Q8CII8 AC150661.1-201ENSMUST00000222563 495 ntBASIC7.78□□□□□ -1.16
Syne4Q8CII8 Gm2139-201ENSMUST00000222569 1075 ntBASIC7.78□□□□□ -1.16
Syne4Q8CII8 AC154838.2-201ENSMUST00000226602 747 ntBASIC7.78□□□□□ -1.16
Syne4Q8CII8 AC132833.4-201ENSMUST00000228313 203 ntBASIC7.78□□□□□ -1.16
Syne4Q8CII8 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Syne4Q8CII8 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Syne4Q8CII8 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Syne4Q8CII8 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Syne4Q8CII8 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Syne4Q8CII8 Gm28704-201ENSMUST00000186589 2169 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Syne4Q8CII8 Gm29636-201ENSMUST00000188149 2169 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Syne4Q8CII8 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Syne4Q8CII8 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Syne4Q8CII8 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
Syne4Q8CII8 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Syne4Q8CII8 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC7.78□□□□□ -1.16
Syne4Q8CII8 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Syne4Q8CII8 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Syne4Q8CII8 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Syne4Q8CII8 Fam216b-201ENSMUST00000066437 2241 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Syne4Q8CII8 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Syne4Q8CII8 Gm18716-201ENSMUST00000204507 1603 ntBASIC7.78□□□□□ -1.16
Syne4Q8CII8 Gm9839-201ENSMUST00000195252 1437 ntBASIC7.78□□□□□ -1.16
Syne4Q8CII8 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.16
Syne4Q8CII8 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.16
Syne4Q8CII8 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Syne4Q8CII8 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC7.77□□□□□ -1.17
Syne4Q8CII8 Gm44669-201ENSMUST00000207774 1969 ntBASIC7.77□□□□□ -1.17
Syne4Q8CII8 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Syne4Q8CII8 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Syne4Q8CII8 Slco6b1-202ENSMUST00000178359 1778 ntBASIC7.77□□□□□ -1.17
Syne4Q8CII8 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Syne4Q8CII8 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Syne4Q8CII8 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Syne4Q8CII8 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Syne4Q8CII8 Gm43497-201ENSMUST00000201137 2316 ntBASIC7.77□□□□□ -1.17
Syne4Q8CII8 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Syne4Q8CII8 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Syne4Q8CII8 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Syne4Q8CII8 Gm14614-201ENSMUST00000119873 384 ntBASIC7.77□□□□□ -1.17
Syne4Q8CII8 Gm11504-201ENSMUST00000120211 173 ntBASIC7.77□□□□□ -1.17
Syne4Q8CII8 Gm15712-201ENSMUST00000120369 1156 ntBASIC7.77□□□□□ -1.17
Syne4Q8CII8 Gm25178-201ENSMUST00000122633 325 ntBASIC7.77□□□□□ -1.17
Syne4Q8CII8 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Syne4Q8CII8 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Syne4Q8CII8 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC7.77□□□□□ -1.17
Syne4Q8CII8 Gm25219-201ENSMUST00000157545 330 ntBASIC7.77□□□□□ -1.17
Syne4Q8CII8 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC7.77□□□□□ -1.17
Syne4Q8CII8 Gm17217-201ENSMUST00000166613 469 ntBASIC7.77□□□□□ -1.17
Syne4Q8CII8 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Syne4Q8CII8 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Syne4Q8CII8 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC7.77□□□□□ -1.17
Syne4Q8CII8 Gm37328-201ENSMUST00000193191 640 ntBASIC7.77□□□□□ -1.17
Syne4Q8CII8 Gm5324-201ENSMUST00000208115 476 ntBASIC7.77□□□□□ -1.17
Syne4Q8CII8 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC7.77□□□□□ -1.17
Syne4Q8CII8 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC7.77□□□□□ -1.17
Syne4Q8CII8 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC7.77□□□□□ -1.17
Syne4Q8CII8 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC7.77□□□□□ -1.17
Syne4Q8CII8 CT030645.2-201ENSMUST00000224321 1012 ntBASIC7.77□□□□□ -1.17
Syne4Q8CII8 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Syne4Q8CII8 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Syne4Q8CII8 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Syne4Q8CII8 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Syne4Q8CII8 Gm42771-201ENSMUST00000198342 2486 ntBASIC7.77□□□□□ -1.17
Syne4Q8CII8 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Syne4Q8CII8 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
Syne4Q8CII8 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC7.77□□□□□ -1.17
Syne4Q8CII8 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC7.77□□□□□ -1.17
Syne4Q8CII8 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Syne4Q8CII8 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Syne4Q8CII8 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Syne4Q8CII8 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Syne4Q8CII8 Tmem161b-206ENSMUST00000225069 2414 ntBASIC7.77□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms