Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Gm43335-201ENSMUST00000198299 3276 ntBASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Gm5387-201ENSMUST00000119776 857 ntBASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Gm13462-201ENSMUST00000121472 961 ntBASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Gm11787-201ENSMUST00000121996 1050 ntBASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Gm24735-201ENSMUST00000158859 118 ntBASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Gm7707-201ENSMUST00000165950 1156 ntBASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Gm17786-201ENSMUST00000182000 427 ntBASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Gm20813-201ENSMUST00000186646 705 ntBASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Gm21923-201ENSMUST00000188455 696 ntBASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Gm7270-201ENSMUST00000195818 1128 ntBASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Gm43436-201ENSMUST00000199308 147 ntBASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Gm45100-201ENSMUST00000209153 391 ntBASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.98□□□□□ -1.29
Ccdc28aQ8CEI3 Gm37254-201ENSMUST00000193542 3901 ntBASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Gm7129-201ENSMUST00000117402 997 ntBASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Gm14865-201ENSMUST00000117523 494 ntBASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Gm5135-201ENSMUST00000121100 573 ntBASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Gm12518-201ENSMUST00000122075 779 ntBASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Gm15242-201ENSMUST00000122459 283 ntBASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Gm25962-201ENSMUST00000157173 168 ntBASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Gm23392-201ENSMUST00000157580 113 ntBASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Gm22523-201ENSMUST00000158696 100 ntBASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Gm27152-201ENSMUST00000183828 99 ntBASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Gm18349-201ENSMUST00000187440 904 ntBASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Gm44984-201ENSMUST00000207802 394 ntBASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 AC124450.1-201ENSMUST00000225569 495 ntBASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Gm43410-201ENSMUST00000197510 2234 ntBASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Gm8700-201ENSMUST00000222187 3054 ntBASIC6.97□□□□□ -1.29
Ccdc28aQ8CEI3 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
Ccdc28aQ8CEI3 AC130661.1-201ENSMUST00000218248 1680 ntBASIC6.96□□□□□ -1.29
Ccdc28aQ8CEI3 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Ccdc28aQ8CEI3 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
Ccdc28aQ8CEI3 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
Ccdc28aQ8CEI3 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
Ccdc28aQ8CEI3 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC6.96□□□□□ -1.29
Ccdc28aQ8CEI3 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Ccdc28aQ8CEI3 Gm44677-201ENSMUST00000209151 3739 ntBASIC6.96□□□□□ -1.29
Ccdc28aQ8CEI3 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Ccdc28aQ8CEI3 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms