Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Pclo-202ENSMUST00000182407 16846 ntTSL 5 BASIC9.48□□□□□ -0.89
Usp47Q8BY87 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC9.48□□□□□ -0.89
Usp47Q8BY87 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC9.48□□□□□ -0.89
Usp47Q8BY87 Gm38366-201ENSMUST00000193127 1934 ntBASIC9.48□□□□□ -0.89
Usp47Q8BY87 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Usp47Q8BY87 Gm38178-201ENSMUST00000194502 2471 ntBASIC9.48□□□□□ -0.89
Usp47Q8BY87 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Usp47Q8BY87 Olfr686-203ENSMUST00000216143 2612 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Usp47Q8BY87 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Usp47Q8BY87 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Usp47Q8BY87 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
Usp47Q8BY87 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Usp47Q8BY87 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Usp47Q8BY87 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Usp47Q8BY87 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Usp47Q8BY87 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Usp47Q8BY87 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Usp47Q8BY87 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC9.48□□□□□ -0.89
Usp47Q8BY87 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Usp47Q8BY87 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC9.48□□□□□ -0.89
Usp47Q8BY87 Gm24173-201ENSMUST00000104130 128 ntBASIC9.48□□□□□ -0.89
Usp47Q8BY87 Gm22284-201ENSMUST00000104132 132 ntBASIC9.48□□□□□ -0.89
Usp47Q8BY87 Gm14796-201ENSMUST00000121216 959 ntBASIC9.48□□□□□ -0.89
Usp47Q8BY87 Gm15696-201ENSMUST00000121730 445 ntBASIC9.48□□□□□ -0.89
Usp47Q8BY87 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Usp47Q8BY87 Mir1953-201ENSMUST00000157866 89 ntBASIC9.48□□□□□ -0.89
Usp47Q8BY87 Gm25675-201ENSMUST00000174979 118 ntBASIC9.48□□□□□ -0.89
Usp47Q8BY87 Gm37380-201ENSMUST00000193752 397 ntBASIC9.48□□□□□ -0.89
Usp47Q8BY87 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC9.48□□□□□ -0.89
Usp47Q8BY87 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Usp47Q8BY87 Gm10205-201ENSMUST00000087431 234 ntBASIC9.48□□□□□ -0.89
Usp47Q8BY87 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC9.48□□□□□ -0.89
Usp47Q8BY87 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Usp47Q8BY87 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Usp47Q8BY87 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Usp47Q8BY87 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Usp47Q8BY87 AL450321.1-201ENSMUST00000220600 3550 ntBASIC9.47□□□□□ -0.89
Usp47Q8BY87 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Usp47Q8BY87 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Usp47Q8BY87 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp47Q8BY87 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Usp47Q8BY87 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp47Q8BY87 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp47Q8BY87 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp47Q8BY87 Gm28112-201ENSMUST00000190898 1875 ntBASIC9.47□□□□□ -0.89
Usp47Q8BY87 Gm43176-201ENSMUST00000199653 2989 ntBASIC9.47□□□□□ -0.89
Usp47Q8BY87 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC9.47□□□□□ -0.89
Usp47Q8BY87 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Usp47Q8BY87 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Usp47Q8BY87 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Usp47Q8BY87 Hpgds-201ENSMUST00000031982 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp47Q8BY87 Gm8534-201ENSMUST00000118553 766 ntBASIC9.47□□□□□ -0.89
Usp47Q8BY87 Gm16016-201ENSMUST00000120831 550 ntBASIC9.47□□□□□ -0.89
Usp47Q8BY87 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC9.47□□□□□ -0.89
Usp47Q8BY87 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC9.47□□□□□ -0.89
Usp47Q8BY87 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC9.47□□□□□ -0.89
Usp47Q8BY87 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp47Q8BY87 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp47Q8BY87 Gm26509-201ENSMUST00000180947 948 ntBASIC9.47□□□□□ -0.89
Usp47Q8BY87 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp47Q8BY87 Mir6911-201ENSMUST00000184241 69 ntBASIC9.47□□□□□ -0.89
Usp47Q8BY87 Gm27601-201ENSMUST00000184794 127 ntBASIC9.47□□□□□ -0.89
Usp47Q8BY87 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Usp47Q8BY87 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp47Q8BY87 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Usp47Q8BY87 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp47Q8BY87 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp47Q8BY87 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp47Q8BY87 Gm21728-201ENSMUST00000188442 695 ntBASIC9.47□□□□□ -0.89
Usp47Q8BY87 Gm21889-201ENSMUST00000188487 695 ntBASIC9.47□□□□□ -0.89
Usp47Q8BY87 Gm20932-201ENSMUST00000189115 694 ntBASIC9.47□□□□□ -0.89
Usp47Q8BY87 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Usp47Q8BY87 Gm21920-201ENSMUST00000190042 695 ntBASIC9.47□□□□□ -0.89
Usp47Q8BY87 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp47Q8BY87 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Usp47Q8BY87 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp47Q8BY87 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC9.47□□□□□ -0.89
Usp47Q8BY87 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC9.47□□□□□ -0.89
Usp47Q8BY87 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Usp47Q8BY87 Pramel-201ENSMUST00000118979 1383 ntBASIC9.47□□□□□ -0.89
Usp47Q8BY87 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Usp47Q8BY87 Gm45073-201ENSMUST00000207688 4247 ntBASIC9.47□□□□□ -0.89
Usp47Q8BY87 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp47Q8BY87 Gm10555-201ENSMUST00000193178 1791 ntBASIC9.46□□□□□ -0.89
Usp47Q8BY87 Gm14802-201ENSMUST00000121944 1885 ntBASIC9.46□□□□□ -0.89
Usp47Q8BY87 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC9.46□□□□□ -0.89
Usp47Q8BY87 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Usp47Q8BY87 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Usp47Q8BY87 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Usp47Q8BY87 Gm43398-201ENSMUST00000196584 2742 ntBASIC9.46□□□□□ -0.89
Usp47Q8BY87 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Usp47Q8BY87 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Usp47Q8BY87 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Usp47Q8BY87 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Usp47Q8BY87 AC126549.1-201ENSMUST00000225044 3687 ntBASIC9.46□□□□□ -0.89
Usp47Q8BY87 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Usp47Q8BY87 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Usp47Q8BY87 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Usp47Q8BY87 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Usp47Q8BY87 Gm22820-201ENSMUST00000157205 329 ntBASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms