Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC8.78□□□□□ -1
Col16a1Q8BLX7 3632451O06Rik-201ENSMUST00000036972 8831 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Col16a1Q8BLX7 C130071C03Rik-201ENSMUST00000131907 3590 ntTSL 1 (best) BASIC8.78□□□□□ -1
Col16a1Q8BLX7 Pex7-201ENSMUST00000020182 8099 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col16a1Q8BLX7 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Col16a1Q8BLX7 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC8.78□□□□□ -1
Col16a1Q8BLX7 Gm14870-201ENSMUST00000118414 156 ntBASIC8.78□□□□□ -1
Col16a1Q8BLX7 Gm12229-201ENSMUST00000120487 468 ntBASIC8.78□□□□□ -1
Col16a1Q8BLX7 Gm15158-201ENSMUST00000120577 570 ntBASIC8.78□□□□□ -1
Col16a1Q8BLX7 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC8.78□□□□□ -1
Col16a1Q8BLX7 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC8.78□□□□□ -1
Col16a1Q8BLX7 Mir3473e-201ENSMUST00000183932 110 ntBASIC8.78□□□□□ -1
Col16a1Q8BLX7 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC8.78□□□□□ -1
Col16a1Q8BLX7 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC8.78□□□□□ -1
Col16a1Q8BLX7 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC8.78□□□□□ -1
Col16a1Q8BLX7 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC8.78□□□□□ -1
Col16a1Q8BLX7 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC8.78□□□□□ -1
Col16a1Q8BLX7 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC8.78□□□□□ -1
Col16a1Q8BLX7 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC8.78□□□□□ -1
Col16a1Q8BLX7 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC8.78□□□□□ -1
Col16a1Q8BLX7 Gm5853-201ENSMUST00000197183 632 ntBASIC8.78□□□□□ -1
Col16a1Q8BLX7 Gm42619-201ENSMUST00000197564 1136 ntBASIC8.78□□□□□ -1
Col16a1Q8BLX7 Gm3321-201ENSMUST00000200603 1129 ntBASIC8.78□□□□□ -1
Col16a1Q8BLX7 Gm44312-201ENSMUST00000203536 469 ntBASIC8.78□□□□□ -1
Col16a1Q8BLX7 Gm44265-201ENSMUST00000203631 465 ntBASIC8.78□□□□□ -1
Col16a1Q8BLX7 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC8.78□□□□□ -1
Col16a1Q8BLX7 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC8.78□□□□□ -1
Col16a1Q8BLX7 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col16a1Q8BLX7 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC8.78□□□□□ -1
Col16a1Q8BLX7 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Col16a1Q8BLX7 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC8.78□□□□□ -1
Col16a1Q8BLX7 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Col16a1Q8BLX7 Acsl6-204ENSMUST00000093106 5804 ntAPPRIS ALT1 TSL 1 (best) BASIC8.77□□□□□ -1
Col16a1Q8BLX7 Gm28667-201ENSMUST00000189873 2171 ntBASIC8.77□□□□□ -1
Col16a1Q8BLX7 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC8.77□□□□□ -1
Col16a1Q8BLX7 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC8.77□□□□□ -1
Col16a1Q8BLX7 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC8.77□□□□□ -1
Col16a1Q8BLX7 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC8.77□□□□□ -1.01
Col16a1Q8BLX7 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col16a1Q8BLX7 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col16a1Q8BLX7 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Col16a1Q8BLX7 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Col16a1Q8BLX7 Gm6786-201ENSMUST00000203165 1915 ntBASIC8.77□□□□□ -1.01
Col16a1Q8BLX7 Exoc5-207ENSMUST00000162175 12699 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col16a1Q8BLX7 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col16a1Q8BLX7 Zfp944-201ENSMUST00000115535 2784 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Col16a1Q8BLX7 Ebpl-201ENSMUST00000022494 10092 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col16a1Q8BLX7 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Col16a1Q8BLX7 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC8.77□□□□□ -1.01
Col16a1Q8BLX7 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col16a1Q8BLX7 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC8.77□□□□□ -1.01
Col16a1Q8BLX7 Gm37772-201ENSMUST00000191635 1394 ntBASIC8.77□□□□□ -1.01
Col16a1Q8BLX7 AC140393.3-201ENSMUST00000228396 1352 ntBASIC8.77□□□□□ -1.01
Col16a1Q8BLX7 Gm12442-201ENSMUST00000118372 338 ntBASIC8.77□□□□□ -1.01
Col16a1Q8BLX7 Gm14938-201ENSMUST00000119482 943 ntBASIC8.77□□□□□ -1.01
Col16a1Q8BLX7 Gm14796-201ENSMUST00000121216 959 ntBASIC8.77□□□□□ -1.01
Col16a1Q8BLX7 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC8.77□□□□□ -1.01
Col16a1Q8BLX7 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Col16a1Q8BLX7 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC8.77□□□□□ -1.01
Col16a1Q8BLX7 Gm42799-201ENSMUST00000201331 328 ntBASIC8.77□□□□□ -1.01
Col16a1Q8BLX7 Olfr923-204ENSMUST00000219798 1068 ntBASIC8.77□□□□□ -1.01
Col16a1Q8BLX7 AL669819.1-201ENSMUST00000225143 330 ntBASIC8.77□□□□□ -1.01
Col16a1Q8BLX7 AC125117.2-201ENSMUST00000228344 1140 ntBASIC8.77□□□□□ -1.01
Col16a1Q8BLX7 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Col16a1Q8BLX7 Chn2-202ENSMUST00000067741 2983 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Col16a1Q8BLX7 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col16a1Q8BLX7 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Col16a1Q8BLX7 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC8.77□□□□□ -1.01
Col16a1Q8BLX7 Olfr157-201ENSMUST00000214281 6617 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Col16a1Q8BLX7 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Col16a1Q8BLX7 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC8.76□□□□□ -1.01
Col16a1Q8BLX7 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Col16a1Q8BLX7 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Col16a1Q8BLX7 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Col16a1Q8BLX7 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col16a1Q8BLX7 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col16a1Q8BLX7 Vps8-206ENSMUST00000118923 4838 ntTSL 5 BASIC8.76□□□□□ -1.01
Col16a1Q8BLX7 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col16a1Q8BLX7 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Col16a1Q8BLX7 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col16a1Q8BLX7 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC8.76□□□□□ -1.01
Col16a1Q8BLX7 Gm37022-201ENSMUST00000192517 2254 ntBASIC8.76□□□□□ -1.01
Col16a1Q8BLX7 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col16a1Q8BLX7 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col16a1Q8BLX7 Sbno1-216ENSMUST00000199808 10161 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col16a1Q8BLX7 Gm14935-201ENSMUST00000121528 1708 ntBASIC8.76□□□□□ -1.01
Col16a1Q8BLX7 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Col16a1Q8BLX7 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC8.76□□□□□ -1.01
Col16a1Q8BLX7 Gm13641-201ENSMUST00000117993 473 ntBASIC8.76□□□□□ -1.01
Col16a1Q8BLX7 Gm23884-201ENSMUST00000122687 294 ntBASIC8.76□□□□□ -1.01
Col16a1Q8BLX7 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC8.76□□□□□ -1.01
Col16a1Q8BLX7 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Col16a1Q8BLX7 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Col16a1Q8BLX7 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC8.76□□□□□ -1.01
Col16a1Q8BLX7 Mir6367-201ENSMUST00000183385 102 ntBASIC8.76□□□□□ -1.01
Col16a1Q8BLX7 Gm43160-201ENSMUST00000196453 421 ntBASIC8.76□□□□□ -1.01
Col16a1Q8BLX7 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC8.76□□□□□ -1.01
Col16a1Q8BLX7 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC8.76□□□□□ -1.01
Col16a1Q8BLX7 Arhgap21-210ENSMUST00000154230 6972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col16a1Q8BLX7 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 104.4 ms