Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Usp54Q8BL06 Gm28112-201ENSMUST00000190898 1875 ntBASIC9.49□□□□□ -0.89
Usp54Q8BL06 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Usp54Q8BL06 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Usp54Q8BL06 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Usp54Q8BL06 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC9.49□□□□□ -0.89
Usp54Q8BL06 Qrich2-204ENSMUST00000208602 7260 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Usp54Q8BL06 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Usp54Q8BL06 Gm12919-201ENSMUST00000119855 1594 ntBASIC9.49□□□□□ -0.89
Usp54Q8BL06 Tsc1-202ENSMUST00000113867 7682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Usp54Q8BL06 Tsc1-201ENSMUST00000028155 7674 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Usp54Q8BL06 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Usp54Q8BL06 Gm37234-201ENSMUST00000193259 1441 ntBASIC9.49□□□□□ -0.89
Usp54Q8BL06 Gm37735-201ENSMUST00000193995 1406 ntBASIC9.49□□□□□ -0.89
Usp54Q8BL06 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Usp54Q8BL06 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Usp54Q8BL06 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC9.49□□□□□ -0.89
Usp54Q8BL06 Gm16511-201ENSMUST00000120019 564 ntBASIC9.49□□□□□ -0.89
Usp54Q8BL06 Gm15158-201ENSMUST00000120577 570 ntBASIC9.49□□□□□ -0.89
Usp54Q8BL06 Gm15959-201ENSMUST00000121724 368 ntBASIC9.49□□□□□ -0.89
Usp54Q8BL06 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Usp54Q8BL06 Gm23071-201ENSMUST00000158242 115 ntBASIC9.49□□□□□ -0.89
Usp54Q8BL06 Mir6952-201ENSMUST00000185092 61 ntBASIC9.49□□□□□ -0.89
Usp54Q8BL06 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC9.49□□□□□ -0.89
Usp54Q8BL06 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC9.49□□□□□ -0.89
Usp54Q8BL06 Olfr923-204ENSMUST00000219798 1068 ntBASIC9.49□□□□□ -0.89
Usp54Q8BL06 Gm9321-201ENSMUST00000221179 778 ntBASIC9.49□□□□□ -0.89
Usp54Q8BL06 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC9.49□□□□□ -0.89
Usp54Q8BL06 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Usp54Q8BL06 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Usp54Q8BL06 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Usp54Q8BL06 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Usp54Q8BL06 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Usp54Q8BL06 Tcf20-202ENSMUST00000109510 7347 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Usp54Q8BL06 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Usp54Q8BL06 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Usp54Q8BL06 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Usp54Q8BL06 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Usp54Q8BL06 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Usp54Q8BL06 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Usp54Q8BL06 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Usp54Q8BL06 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Usp54Q8BL06 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Usp54Q8BL06 Gm23440-201ENSMUST00000104299 130 ntBASIC9.48□□□□□ -0.89
Usp54Q8BL06 Gm11624-201ENSMUST00000118579 1041 ntBASIC9.48□□□□□ -0.89
Usp54Q8BL06 Gm14300-201ENSMUST00000120800 946 ntBASIC9.48□□□□□ -0.89
Usp54Q8BL06 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Usp54Q8BL06 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.89
Usp54Q8BL06 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC9.48□□□□□ -0.89
Usp54Q8BL06 Gm21524-201ENSMUST00000190499 696 ntBASIC9.48□□□□□ -0.89
Usp54Q8BL06 Gm21715-201ENSMUST00000191056 694 ntBASIC9.48□□□□□ -0.89
Usp54Q8BL06 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Usp54Q8BL06 Gm43160-201ENSMUST00000196453 421 ntBASIC9.48□□□□□ -0.89
Usp54Q8BL06 Ass-ps1-201ENSMUST00000197717 761 ntBASIC9.48□□□□□ -0.89
Usp54Q8BL06 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC9.48□□□□□ -0.89
Usp54Q8BL06 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC9.48□□□□□ -0.89
Usp54Q8BL06 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC9.48□□□□□ -0.89
Usp54Q8BL06 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Usp54Q8BL06 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.89
Usp54Q8BL06 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Usp54Q8BL06 Gm37783-201ENSMUST00000192025 1856 ntBASIC9.48□□□□□ -0.89
Usp54Q8BL06 Nup214-201ENSMUST00000065398 6605 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Usp54Q8BL06 Nlrp12-201ENSMUST00000108653 6928 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Usp54Q8BL06 Gm37790-201ENSMUST00000193136 3346 ntBASIC9.48□□□□□ -0.89
Usp54Q8BL06 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC9.48□□□□□ -0.89
Usp54Q8BL06 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Usp54Q8BL06 AC164978.1-201ENSMUST00000228608 4011 ntBASIC9.48□□□□□ -0.89
Usp54Q8BL06 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Usp54Q8BL06 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Usp54Q8BL06 Grk1-202ENSMUST00000209909 7431 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Usp54Q8BL06 Grk1-201ENSMUST00000033827 7425 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp54Q8BL06 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Usp54Q8BL06 Gm44417-201ENSMUST00000203298 3359 ntBASIC9.47□□□□□ -0.89
Usp54Q8BL06 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp54Q8BL06 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Usp54Q8BL06 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC9.47□□□□□ -0.89
Usp54Q8BL06 Ank1-213ENSMUST00000141784 6566 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Usp54Q8BL06 Gm16204-201ENSMUST00000117864 1897 ntBASIC9.47□□□□□ -0.89
Usp54Q8BL06 Gm43982-201ENSMUST00000204995 1829 ntBASIC9.47□□□□□ -0.89
Usp54Q8BL06 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Usp54Q8BL06 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Usp54Q8BL06 Gm28667-201ENSMUST00000189873 2171 ntBASIC9.47□□□□□ -0.89
Usp54Q8BL06 Gm25795-201ENSMUST00000104421 132 ntBASIC9.47□□□□□ -0.89
Usp54Q8BL06 Gm13641-201ENSMUST00000117993 473 ntBASIC9.47□□□□□ -0.89
Usp54Q8BL06 Gm11622-201ENSMUST00000120525 691 ntBASIC9.47□□□□□ -0.89
Usp54Q8BL06 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Usp54Q8BL06 Gm22599-201ENSMUST00000157597 132 ntBASIC9.47□□□□□ -0.89
Usp54Q8BL06 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC9.47□□□□□ -0.89
Usp54Q8BL06 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC9.47□□□□□ -0.89
Usp54Q8BL06 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp54Q8BL06 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC9.47□□□□□ -0.89
Usp54Q8BL06 Mylf-ps-201ENSMUST00000222174 421 ntBASIC9.47□□□□□ -0.89
Usp54Q8BL06 AC116591.1-201ENSMUST00000227919 351 ntBASIC9.47□□□□□ -0.89
Usp54Q8BL06 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Usp54Q8BL06 Greb1-203ENSMUST00000159120 6346 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp54Q8BL06 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp54Q8BL06 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Usp54Q8BL06 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp54Q8BL06 AC156645.1-201ENSMUST00000223066 5194 ntBASIC9.47□□□□□ -0.89
Usp54Q8BL06 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms