Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Gm37033-201ENSMUST00000193199 7350 ntBASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Gm42676-201ENSMUST00000197609 2686 ntBASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Gm44121-201ENSMUST00000205169 2006 ntBASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Gm7961-201ENSMUST00000201338 1436 ntBASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Gm22707-201ENSMUST00000103834 110 ntBASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Gm25180-201ENSMUST00000157746 115 ntBASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Gm17217-201ENSMUST00000166613 469 ntBASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Gm4308-201ENSMUST00000179735 914 ntBASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Gm5300-201ENSMUST00000182201 1003 ntBASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Gm26413-201ENSMUST00000196783 126 ntBASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Gm43147-201ENSMUST00000196944 542 ntBASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Gm43108-201ENSMUST00000200525 293 ntBASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Gm44380-201ENSMUST00000203125 293 ntBASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Gm5314-201ENSMUST00000204852 466 ntBASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 AC134439.2-201ENSMUST00000221950 467 ntBASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 CT009742.1-201ENSMUST00000222507 702 ntBASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 AC156790.1-201ENSMUST00000226572 559 ntBASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 AC153144.1-201ENSMUST00000221759 3139 ntBASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Gm37127-201ENSMUST00000192924 3036 ntBASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Gm44704-201ENSMUST00000208963 1990 ntBASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ccdc40Q8BI79 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Gm24284-201ENSMUST00000104240 142 ntBASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Gm25498-201ENSMUST00000104424 129 ntBASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Gm14201-201ENSMUST00000117627 289 ntBASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Gm13137-201ENSMUST00000118035 345 ntBASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Gm9439-201ENSMUST00000119554 973 ntBASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Gm15158-201ENSMUST00000120577 570 ntBASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Gm23276-201ENSMUST00000157913 138 ntBASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Gm8192-201ENSMUST00000182196 958 ntBASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Gm30517-201ENSMUST00000197350 772 ntBASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Gm8539-201ENSMUST00000199822 501 ntBASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Gm21054-201ENSMUST00000203981 380 ntBASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Gm7943-201ENSMUST00000212078 1034 ntBASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Gm46424-201ENSMUST00000221567 168 ntBASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 AC164436.1-201ENSMUST00000227074 772 ntBASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Gm22053-201ENSMUST00000083394 200 ntBASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ccdc40Q8BI79 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms