Protein–RNA interactions for Protein: Q78RX3

Smim12, Small integral membrane protein 12, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim12Q78RX3 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Smim12Q78RX3 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Smim12Q78RX3 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.71□□□□□ -1.49
Smim12Q78RX3 Gm14245-201ENSMUST00000118939 1843 ntBASIC5.71□□□□□ -1.49
Smim12Q78RX3 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Smim12Q78RX3 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Smim12Q78RX3 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Smim12Q78RX3 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Smim12Q78RX3 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Smim12Q78RX3 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC5.71□□□□□ -1.49
Smim12Q78RX3 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
Smim12Q78RX3 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Smim12Q78RX3 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Smim12Q78RX3 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Smim12Q78RX3 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Smim12Q78RX3 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
Smim12Q78RX3 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC5.71□□□□□ -1.5
Smim12Q78RX3 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC5.71□□□□□ -1.5
Smim12Q78RX3 Gm15928-201ENSMUST00000122455 280 ntBASIC5.71□□□□□ -1.5
Smim12Q78RX3 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC5.71□□□□□ -1.5
Smim12Q78RX3 Gm22948-201ENSMUST00000158561 243 ntBASIC5.71□□□□□ -1.5
Smim12Q78RX3 Gm20430-201ENSMUST00000172474 207 ntBASIC5.71□□□□□ -1.5
Smim12Q78RX3 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Smim12Q78RX3 Gm22569-201ENSMUST00000175545 124 ntBASIC5.71□□□□□ -1.5
Smim12Q78RX3 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
Smim12Q78RX3 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC5.71□□□□□ -1.5
Smim12Q78RX3 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC5.71□□□□□ -1.5
Smim12Q78RX3 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC5.71□□□□□ -1.5
Smim12Q78RX3 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC5.71□□□□□ -1.5
Smim12Q78RX3 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC5.71□□□□□ -1.5
Smim12Q78RX3 Gm8245-201ENSMUST00000182434 987 ntBASIC5.71□□□□□ -1.5
Smim12Q78RX3 Mir6922-201ENSMUST00000185099 66 ntBASIC5.71□□□□□ -1.5
Smim12Q78RX3 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC5.71□□□□□ -1.5
Smim12Q78RX3 Gm7419-201ENSMUST00000209962 925 ntBASIC5.71□□□□□ -1.5
Smim12Q78RX3 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC5.71□□□□□ -1.5
Smim12Q78RX3 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC5.71□□□□□ -1.5
Smim12Q78RX3 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC5.71□□□□□ -1.5
Smim12Q78RX3 AC159297.1-201ENSMUST00000218689 290 ntBASIC5.71□□□□□ -1.5
Smim12Q78RX3 AC122327.2-201ENSMUST00000220883 120 ntBASIC5.71□□□□□ -1.5
Smim12Q78RX3 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC5.71□□□□□ -1.5
Smim12Q78RX3 AC122327.3-201ENSMUST00000221852 120 ntBASIC5.71□□□□□ -1.5
Smim12Q78RX3 AC129597.1-201ENSMUST00000223046 1234 ntBASIC5.71□□□□□ -1.5
Smim12Q78RX3 AC166341.1-201ENSMUST00000223360 105 ntBASIC5.71□□□□□ -1.5
Smim12Q78RX3 AL844586.1-201ENSMUST00000224297 1042 ntBASIC5.71□□□□□ -1.5
Smim12Q78RX3 AC154834.1-201ENSMUST00000224697 358 ntBASIC5.71□□□□□ -1.5
Smim12Q78RX3 AC131029.2-203ENSMUST00000228116 1244 ntBASIC5.71□□□□□ -1.5
Smim12Q78RX3 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Smim12Q78RX3 Olfr715-201ENSMUST00000076958 1131 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Smim12Q78RX3 Gm25587-201ENSMUST00000082498 166 ntBASIC5.71□□□□□ -1.5
Smim12Q78RX3 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Smim12Q78RX3 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Smim12Q78RX3 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Smim12Q78RX3 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Smim12Q78RX3 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Smim12Q78RX3 AC165080.3-201ENSMUST00000217162 3116 ntBASIC5.71□□□□□ -1.5
Smim12Q78RX3 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Smim12Q78RX3 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Smim12Q78RX3 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Smim12Q78RX3 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Smim12Q78RX3 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Smim12Q78RX3 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Smim12Q78RX3 AL450321.1-201ENSMUST00000220600 3550 ntBASIC5.71□□□□□ -1.5
Smim12Q78RX3 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC5.71□□□□□ -1.5
Smim12Q78RX3 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Smim12Q78RX3 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Smim12Q78RX3 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
Smim12Q78RX3 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Smim12Q78RX3 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Smim12Q78RX3 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Smim12Q78RX3 AC091783.1-201ENSMUST00000223614 1613 ntBASIC5.7□□□□□ -1.5
Smim12Q78RX3 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Smim12Q78RX3 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Smim12Q78RX3 Gm42613-201ENSMUST00000199975 1931 ntBASIC5.7□□□□□ -1.5
Smim12Q78RX3 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Smim12Q78RX3 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Smim12Q78RX3 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Smim12Q78RX3 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Smim12Q78RX3 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Smim12Q78RX3 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Smim12Q78RX3 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC5.7□□□□□ -1.5
Smim12Q78RX3 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Smim12Q78RX3 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
Smim12Q78RX3 Gm37140-201ENSMUST00000192914 1684 ntBASIC5.7□□□□□ -1.5
Smim12Q78RX3 Gm26079-201ENSMUST00000104066 133 ntBASIC5.7□□□□□ -1.5
Smim12Q78RX3 Gm23529-201ENSMUST00000104562 132 ntBASIC5.7□□□□□ -1.5
Smim12Q78RX3 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Smim12Q78RX3 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC5.7□□□□□ -1.5
Smim12Q78RX3 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC5.7□□□□□ -1.5
Smim12Q78RX3 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Smim12Q78RX3 Gm12361-201ENSMUST00000119806 1044 ntBASIC5.7□□□□□ -1.5
Smim12Q78RX3 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Smim12Q78RX3 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Smim12Q78RX3 Gm24286-201ENSMUST00000157632 128 ntBASIC5.7□□□□□ -1.5
Smim12Q78RX3 Gm24782-201ENSMUST00000157641 132 ntBASIC5.7□□□□□ -1.5
Smim12Q78RX3 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.7□□□□□ -1.5
Smim12Q78RX3 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC5.7□□□□□ -1.5
Smim12Q78RX3 Mir7084-201ENSMUST00000183876 70 ntBASIC5.7□□□□□ -1.5
Smim12Q78RX3 Gm27970-201ENSMUST00000184854 407 ntBASIC5.7□□□□□ -1.5
Smim12Q78RX3 Gm29470-201ENSMUST00000188007 696 ntBASIC5.7□□□□□ -1.5
Smim12Q78RX3 Gm37383-201ENSMUST00000191750 745 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms