Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Upf3bQ3ULL6 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Upf3bQ3ULL6 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Upf3bQ3ULL6 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Upf3bQ3ULL6 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Upf3bQ3ULL6 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC7.23□□□□□ -1.25
Upf3bQ3ULL6 Gm11590-201ENSMUST00000118999 1455 ntBASIC7.23□□□□□ -1.25
Upf3bQ3ULL6 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Upf3bQ3ULL6 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Upf3bQ3ULL6 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
Upf3bQ3ULL6 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Gm15930-201ENSMUST00000156603 2037 ntBASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Gm25344-201ENSMUST00000104503 132 ntBASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Gm13141-201ENSMUST00000117417 456 ntBASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Gm14631-201ENSMUST00000119067 594 ntBASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Gm11689-201ENSMUST00000120766 302 ntBASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Gm12181-201ENSMUST00000121448 531 ntBASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Gm14613-201ENSMUST00000122239 752 ntBASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Gm15501-202ENSMUST00000140687 625 ntBASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Gm25395-201ENSMUST00000157343 272 ntBASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Gm23762-201ENSMUST00000158348 106 ntBASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Gm22523-201ENSMUST00000158696 100 ntBASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Gm6726-201ENSMUST00000172786 681 ntBASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Gm5345-201ENSMUST00000183076 1014 ntBASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Gm43689-201ENSMUST00000195951 427 ntBASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Gm44411-201ENSMUST00000204172 349 ntBASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 AC154558.1-201ENSMUST00000222278 415 ntBASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 AC131033.1-201ENSMUST00000228223 279 ntBASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Gm10568-201ENSMUST00000193244 1634 ntBASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 AC125487.2-201ENSMUST00000219810 1300 ntBASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Gm16123-201ENSMUST00000118647 1517 ntBASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Gm43029-201ENSMUST00000201829 1535 ntBASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Gm43876-201ENSMUST00000203831 3229 ntBASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Upf3bQ3ULL6 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Upf3bQ3ULL6 Gm44186-201ENSMUST00000204118 2752 ntBASIC7.21□□□□□ -1.25
Upf3bQ3ULL6 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC7.21□□□□□ -1.25
Upf3bQ3ULL6 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC7.21□□□□□ -1.25
Upf3bQ3ULL6 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Upf3bQ3ULL6 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Upf3bQ3ULL6 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Upf3bQ3ULL6 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC7.21□□□□□ -1.25
Upf3bQ3ULL6 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Upf3bQ3ULL6 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Upf3bQ3ULL6 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Upf3bQ3ULL6 Gm23748-201ENSMUST00000104227 131 ntBASIC7.21□□□□□ -1.26
Upf3bQ3ULL6 Gm2178-201ENSMUST00000104927 357 ntBASIC7.21□□□□□ -1.26
Upf3bQ3ULL6 Gm11501-201ENSMUST00000118039 581 ntBASIC7.21□□□□□ -1.26
Upf3bQ3ULL6 Gm6382-201ENSMUST00000118873 942 ntBASIC7.21□□□□□ -1.26
Upf3bQ3ULL6 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC7.21□□□□□ -1.26
Upf3bQ3ULL6 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC7.21□□□□□ -1.26
Upf3bQ3ULL6 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC7.21□□□□□ -1.26
Upf3bQ3ULL6 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC7.21□□□□□ -1.26
Upf3bQ3ULL6 Gm11962-201ENSMUST00000145746 255 ntBASIC7.21□□□□□ -1.26
Upf3bQ3ULL6 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC7.21□□□□□ -1.26
Upf3bQ3ULL6 Gm23810-201ENSMUST00000175150 74 ntBASIC7.21□□□□□ -1.26
Upf3bQ3ULL6 Gm43396-201ENSMUST00000197506 706 ntBASIC7.21□□□□□ -1.26
Upf3bQ3ULL6 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC7.21□□□□□ -1.26
Upf3bQ3ULL6 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC7.21□□□□□ -1.26
Upf3bQ3ULL6 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Upf3bQ3ULL6 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Upf3bQ3ULL6 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Upf3bQ3ULL6 Mir106b-201ENSMUST00000083580 82 ntBASIC7.21□□□□□ -1.26
Upf3bQ3ULL6 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC7.21□□□□□ -1.26
Upf3bQ3ULL6 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC7.21□□□□□ -1.26
Upf3bQ3ULL6 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Upf3bQ3ULL6 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Upf3bQ3ULL6 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Upf3bQ3ULL6 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Upf3bQ3ULL6 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Upf3bQ3ULL6 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC7.21□□□□□ -1.26
Upf3bQ3ULL6 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC7.21□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms