Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Msx2Q03358 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Msx2Q03358 Gm37100-201ENSMUST00000193344 1353 ntBASIC7.07□□□□□ -1.28
Msx2Q03358 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Msx2Q03358 A130023I24Rik-201ENSMUST00000152709 1897 ntTSL 2 BASIC7.07□□□□□ -1.28
Msx2Q03358 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Msx2Q03358 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Msx2Q03358 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Msx2Q03358 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Msx2Q03358 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Msx2Q03358 Glra4-201ENSMUST00000018739 1831 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Msx2Q03358 Gm8276-201ENSMUST00000192231 1812 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 Gm43982-201ENSMUST00000204995 1829 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 Gm40778-201ENSMUST00000217825 1344 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 AC153143.1-201ENSMUST00000222966 1340 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Msx2Q03358 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Msx2Q03358 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Msx2Q03358 Gm16409-201ENSMUST00000100510 747 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Msx2Q03358 Gm22438-201ENSMUST00000104049 132 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Msx2Q03358 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Msx2Q03358 Gm2237-201ENSMUST00000112595 471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Msx2Q03358 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Msx2Q03358 Rps6-ps4-201ENSMUST00000118499 750 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 Fau-ps2-201ENSMUST00000119333 371 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 Gm13683-201ENSMUST00000119497 1076 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 Gm13902-201ENSMUST00000120168 605 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 Gm11343-201ENSMUST00000120579 599 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 Gm15220-201ENSMUST00000120730 379 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 Gm9143-201ENSMUST00000120745 745 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 Gm8172-201ENSMUST00000120762 750 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 Gm9001-201ENSMUST00000121642 399 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
Msx2Q03358 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Msx2Q03358 Gm15347-201ENSMUST00000145372 385 ntTSL 3 BASIC7.06□□□□□ -1.28
Msx2Q03358 Gm17033-201ENSMUST00000146663 593 ntTSL 3 BASIC7.06□□□□□ -1.28
Msx2Q03358 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC7.06□□□□□ -1.28
Msx2Q03358 Gm16260-201ENSMUST00000155141 304 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 Gm24211-201ENSMUST00000158264 107 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 Gm23385-201ENSMUST00000158592 295 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC7.06□□□□□ -1.28
Msx2Q03358 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Msx2Q03358 Gm17197-201ENSMUST00000163160 452 ntTSL 2 BASIC7.06□□□□□ -1.28
Msx2Q03358 Gm6223-201ENSMUST00000178436 871 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 Gm27160-201ENSMUST00000184837 199 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC7.06□□□□□ -1.28
Msx2Q03358 Gm26901-204ENSMUST00000193732 631 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Msx2Q03358 Gm42808-201ENSMUST00000198212 285 ntTSL 5 BASIC7.06□□□□□ -1.28
Msx2Q03358 Gm9497-201ENSMUST00000199908 538 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 4930557K07Rik-201ENSMUST00000205110 363 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Msx2Q03358 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC7.06□□□□□ -1.28
Msx2Q03358 Gm19201-201ENSMUST00000210127 778 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC7.06□□□□□ -1.28
Msx2Q03358 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC7.06□□□□□ -1.28
Msx2Q03358 Gm17950-201ENSMUST00000214617 646 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 AC156795.1-201ENSMUST00000214655 414 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 AL929417.1-201ENSMUST00000214901 124 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 Gm2089-201ENSMUST00000218294 479 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 Gm18504-201ENSMUST00000220917 929 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 Gm45965-201ENSMUST00000221192 1284 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 AL590616.1-201ENSMUST00000223339 574 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 AC116395.1-201ENSMUST00000225480 1143 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 AC125523.1-201ENSMUST00000228018 934 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 Olfr466-201ENSMUST00000058907 927 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Msx2Q03358 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Msx2Q03358 Rps6-ps2-201ENSMUST00000079841 747 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Msx2Q03358 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC7.06□□□□□ -1.28
Msx2Q03358 Gm43707-201ENSMUST00000196451 3187 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 Rnase13-201ENSMUST00000089771 1412 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Msx2Q03358 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Msx2Q03358 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
Msx2Q03358 AC129085.2-201ENSMUST00000223763 2800 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Msx2Q03358 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC7.06□□□□□ -1.28
Msx2Q03358 AC122357.2-201ENSMUST00000220732 1525 ntBASIC7.06□□□□□ -1.28
Msx2Q03358 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Msx2Q03358 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Msx2Q03358 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Msx2Q03358 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC7.06□□□□□ -1.28
Msx2Q03358 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Msx2Q03358 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Msx2Q03358 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC7.06□□□□□ -1.28
Msx2Q03358 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC7.05□□□□□ -1.28
Msx2Q03358 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Msx2Q03358 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Msx2Q03358 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Msx2Q03358 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC7.05□□□□□ -1.28
Msx2Q03358 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Msx2Q03358 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC7.05□□□□□ -1.28
Msx2Q03358 Gm44661-201ENSMUST00000208830 3503 ntBASIC7.05□□□□□ -1.28
Msx2Q03358 Gm4991-201ENSMUST00000118899 1552 ntBASIC7.05□□□□□ -1.28
Msx2Q03358 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Msx2Q03358 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Msx2Q03358 Gm23192-201ENSMUST00000102434 96 ntBASIC7.05□□□□□ -1.28
Msx2Q03358 Gm24334-201ENSMUST00000104210 128 ntBASIC7.05□□□□□ -1.28
Msx2Q03358 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 100.5 ms