Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Fam214a-201ENSMUST00000081746 3795 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 Kantr-207ENSMUST00000195280 4212 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
PrkdcP97313 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 Cwc22-201ENSMUST00000065889 3471 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 Gm43750-201ENSMUST00000199027 2493 ntBASIC4.45□□□□□ -1.7
PrkdcP97313 AC129308.2-203ENSMUST00000224109 2385 ntBASIC4.45□□□□□ -1.7
PrkdcP97313 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC4.45□□□□□ -1.7
PrkdcP97313 Gm44090-201ENSMUST00000204669 1834 ntBASIC4.45□□□□□ -1.7
PrkdcP97313 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PrkdcP97313 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 Gm15901-201ENSMUST00000117663 941 ntBASIC4.45□□□□□ -1.7
PrkdcP97313 Gm14881-201ENSMUST00000120366 372 ntBASIC4.45□□□□□ -1.7
PrkdcP97313 Gm14038-201ENSMUST00000121500 807 ntBASIC4.45□□□□□ -1.7
PrkdcP97313 Gm28413-201ENSMUST00000189369 291 ntBASIC4.45□□□□□ -1.7
PrkdcP97313 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC4.45□□□□□ -1.7
PrkdcP97313 Gm45249-201ENSMUST00000211021 348 ntBASIC4.45□□□□□ -1.7
PrkdcP97313 Gm39465-202ENSMUST00000215177 470 ntTSL 5 BASIC4.45□□□□□ -1.7
PrkdcP97313 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC4.45□□□□□ -1.7
PrkdcP97313 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PrkdcP97313 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 Gm37234-201ENSMUST00000193259 1441 ntBASIC4.45□□□□□ -1.7
PrkdcP97313 Aldh1l1-203ENSMUST00000130418 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 Gm38366-201ENSMUST00000193127 1934 ntBASIC4.45□□□□□ -1.7
PrkdcP97313 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 Gm36527-201ENSMUST00000195500 3029 ntBASIC4.45□□□□□ -1.7
PrkdcP97313 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 Dclre1b-201ENSMUST00000029435 4345 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC4.44□□□□□ -1.7
PrkdcP97313 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 Gm12482-201ENSMUST00000120435 630 ntBASIC4.44□□□□□ -1.7
PrkdcP97313 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC4.44□□□□□ -1.7
PrkdcP97313 Gm23276-201ENSMUST00000157913 138 ntBASIC4.44□□□□□ -1.7
PrkdcP97313 Gm24295-201ENSMUST00000158298 131 ntBASIC4.44□□□□□ -1.7
PrkdcP97313 Gm25487-201ENSMUST00000158725 125 ntBASIC4.44□□□□□ -1.7
PrkdcP97313 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC4.44□□□□□ -1.7
PrkdcP97313 Gm20691-201ENSMUST00000176889 333 ntBASIC4.44□□□□□ -1.7
PrkdcP97313 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC4.44□□□□□ -1.7
PrkdcP97313 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC4.44□□□□□ -1.7
PrkdcP97313 AL603745.1-201ENSMUST00000215473 532 ntBASIC4.44□□□□□ -1.7
PrkdcP97313 Gm8942-201ENSMUST00000217892 400 ntBASIC4.44□□□□□ -1.7
PrkdcP97313 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PrkdcP97313 Pcsk2-201ENSMUST00000028905 4723 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 Gm7155-201ENSMUST00000121143 1671 ntBASIC4.44□□□□□ -1.7
PrkdcP97313 Gm38178-201ENSMUST00000194502 2471 ntBASIC4.44□□□□□ -1.7
PrkdcP97313 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
PrkdcP97313 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC4.44□□□□□ -1.7
PrkdcP97313 AL450321.1-201ENSMUST00000220600 3550 ntBASIC4.44□□□□□ -1.7
PrkdcP97313 Klhdc7a-201ENSMUST00000105031 7807 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PrkdcP97313 Gm37984-201ENSMUST00000191641 3733 ntBASIC4.44□□□□□ -1.7
PrkdcP97313 Ehmt1-204ENSMUST00000114418 4902 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
PrkdcP97313 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
PrkdcP97313 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 Luzp2-201ENSMUST00000082373 4901 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
PrkdcP97313 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC4.44□□□□□ -1.7
PrkdcP97313 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 Mroh2a-201ENSMUST00000061013 7526 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
PrkdcP97313 Stk11ip-201ENSMUST00000027414 4458 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 Gm12400-201ENSMUST00000120915 1003 ntBASIC4.44□□□□□ -1.7
PrkdcP97313 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC4.44□□□□□ -1.7
PrkdcP97313 Gm26970-201ENSMUST00000182990 964 ntBASIC4.44□□□□□ -1.7
PrkdcP97313 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC4.44□□□□□ -1.7
PrkdcP97313 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC4.44□□□□□ -1.7
PrkdcP97313 Gm5830-201ENSMUST00000049117 443 ntBASIC4.44□□□□□ -1.7
PrkdcP97313 Gm7731-201ENSMUST00000091759 470 ntBASIC4.44□□□□□ -1.7
PrkdcP97313 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC4.44□□□□□ -1.7
PrkdcP97313 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
PrkdcP97313 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC4.44□□□□□ -1.7
PrkdcP97313 Oas3-201ENSMUST00000044833 4720 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
PrkdcP97313 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC4.44□□□□□ -1.7
PrkdcP97313 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
PrkdcP97313 Gm38284-201ENSMUST00000194803 4539 ntBASIC4.44□□□□□ -1.7
PrkdcP97313 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
PrkdcP97313 Slc26a1-201ENSMUST00000051757 3812 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PrkdcP97313 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms