Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC7.41□□□□□ -1.22
CiitaP79621 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CiitaP79621 Gm22552-201ENSMUST00000157796 337 ntBASIC7.41□□□□□ -1.22
CiitaP79621 Gm4202-201ENSMUST00000169025 733 ntBASIC7.41□□□□□ -1.22
CiitaP79621 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC7.41□□□□□ -1.22
CiitaP79621 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CiitaP79621 Gm27295-201ENSMUST00000184264 153 ntBASIC7.41□□□□□ -1.22
CiitaP79621 Gm8524-201ENSMUST00000186232 379 ntBASIC7.41□□□□□ -1.22
CiitaP79621 Gm28583-201ENSMUST00000188903 2141 ntBASIC7.41□□□□□ -1.22
CiitaP79621 Gm17895-201ENSMUST00000194028 874 ntBASIC7.41□□□□□ -1.22
CiitaP79621 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CiitaP79621 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC7.41□□□□□ -1.22
CiitaP79621 Gm45899-201ENSMUST00000212196 1276 ntBASIC7.41□□□□□ -1.22
CiitaP79621 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CiitaP79621 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC7.41□□□□□ -1.22
CiitaP79621 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC7.41□□□□□ -1.22
CiitaP79621 AC129323.1-201ENSMUST00000216733 470 ntBASIC7.41□□□□□ -1.22
CiitaP79621 Gm35619-201ENSMUST00000222548 600 ntBASIC7.41□□□□□ -1.22
CiitaP79621 AC122533.1-201ENSMUST00000225177 767 ntBASIC7.41□□□□□ -1.22
CiitaP79621 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CiitaP79621 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CiitaP79621 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC7.41□□□□□ -1.22
CiitaP79621 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
CiitaP79621 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CiitaP79621 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC7.41□□□□□ -1.22
CiitaP79621 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CiitaP79621 Gm14896-201ENSMUST00000121311 1351 ntBASIC7.41□□□□□ -1.22
CiitaP79621 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC7.41□□□□□ -1.22
CiitaP79621 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CiitaP79621 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CiitaP79621 Gm43279-201ENSMUST00000202376 2512 ntBASIC7.41□□□□□ -1.22
CiitaP79621 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CiitaP79621 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CiitaP79621 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CiitaP79621 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC7.41□□□□□ -1.22
CiitaP79621 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CiitaP79621 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CiitaP79621 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CiitaP79621 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC7.41□□□□□ -1.22
CiitaP79621 Gm37953-201ENSMUST00000195293 1884 ntBASIC7.41□□□□□ -1.22
CiitaP79621 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC7.41□□□□□ -1.22
CiitaP79621 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
CiitaP79621 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CiitaP79621 Gm38070-201ENSMUST00000191850 6480 ntBASIC7.4□□□□□ -1.22
CiitaP79621 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC7.4□□□□□ -1.22
CiitaP79621 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
CiitaP79621 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
CiitaP79621 AC155234.1-201ENSMUST00000225610 2823 ntBASIC7.4□□□□□ -1.22
CiitaP79621 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
CiitaP79621 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CiitaP79621 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
CiitaP79621 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CiitaP79621 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CiitaP79621 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CiitaP79621 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
CiitaP79621 Gm14539-201ENSMUST00000117527 174 ntBASIC7.4□□□□□ -1.22
CiitaP79621 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CiitaP79621 Gm22523-201ENSMUST00000158696 100 ntBASIC7.4□□□□□ -1.22
CiitaP79621 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CiitaP79621 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
CiitaP79621 Gm20615-201ENSMUST00000177503 705 ntBASIC7.4□□□□□ -1.22
CiitaP79621 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC7.4□□□□□ -1.22
CiitaP79621 Ighv8-3-201ENSMUST00000194985 295 ntBASIC7.4□□□□□ -1.22
CiitaP79621 Gm43459-201ENSMUST00000202093 331 ntBASIC7.4□□□□□ -1.22
CiitaP79621 Gm45122-201ENSMUST00000206376 784 ntBASIC7.4□□□□□ -1.22
CiitaP79621 Gm44705-201ENSMUST00000206719 339 ntBASIC7.4□□□□□ -1.22
CiitaP79621 Gm45693-201ENSMUST00000211391 1157 ntBASIC7.4□□□□□ -1.22
CiitaP79621 AC148328.2-201ENSMUST00000216960 262 ntBASIC7.4□□□□□ -1.22
CiitaP79621 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC7.4□□□□□ -1.22
CiitaP79621 CT009711.2-201ENSMUST00000225352 934 ntBASIC7.4□□□□□ -1.22
CiitaP79621 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC7.4□□□□□ -1.22
CiitaP79621 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
CiitaP79621 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
CiitaP79621 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
CiitaP79621 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
CiitaP79621 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC7.4□□□□□ -1.22
CiitaP79621 Gm16123-201ENSMUST00000118647 1517 ntBASIC7.4□□□□□ -1.22
CiitaP79621 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
CiitaP79621 Gm43128-201ENSMUST00000202212 1621 ntBASIC7.4□□□□□ -1.22
CiitaP79621 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
CiitaP79621 Gm42568-201ENSMUST00000195639 1841 ntBASIC7.4□□□□□ -1.23
CiitaP79621 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
CiitaP79621 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CiitaP79621 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
CiitaP79621 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.23
CiitaP79621 AC156163.1-201ENSMUST00000215598 3369 ntBASIC7.4□□□□□ -1.23
CiitaP79621 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.23
CiitaP79621 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
CiitaP79621 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
CiitaP79621 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
CiitaP79621 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CiitaP79621 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CiitaP79621 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CiitaP79621 Gm9226-201ENSMUST00000188352 3489 ntBASIC7.39□□□□□ -1.23
CiitaP79621 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
CiitaP79621 AC134577.3-201ENSMUST00000226490 3000 ntBASIC7.39□□□□□ -1.23
CiitaP79621 Gm15681-201ENSMUST00000137501 2704 ntBASIC7.39□□□□□ -1.23
CiitaP79621 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
CiitaP79621 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
CiitaP79621 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms