Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm37121-201ENSMUST00000192219 2556 ntBASIC7.32□□□□□ -1.24
NcanP55066 Mak-201ENSMUST00000021792 3385 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
NcanP55066 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
NcanP55066 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
NcanP55066 Gm37956-201ENSMUST00000195208 2010 ntBASIC7.32□□□□□ -1.24
NcanP55066 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
NcanP55066 9330158H04Rik-206ENSMUST00000161161 3103 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NcanP55066 Spen-201ENSMUST00000078886 12082 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
NcanP55066 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NcanP55066 Trim38-203ENSMUST00000226039 1999 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
NcanP55066 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC7.31□□□□□ -1.24
NcanP55066 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NcanP55066 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
NcanP55066 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NcanP55066 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NcanP55066 AC139750.1-201ENSMUST00000223962 1300 ntBASIC7.31□□□□□ -1.24
NcanP55066 AC120153.1-201ENSMUST00000226502 1311 ntBASIC7.31□□□□□ -1.24
NcanP55066 Gm43800-201ENSMUST00000201868 2731 ntBASIC7.31□□□□□ -1.24
NcanP55066 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NcanP55066 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
NcanP55066 Gm42881-201ENSMUST00000198636 3344 ntBASIC7.31□□□□□ -1.24
NcanP55066 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
NcanP55066 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
NcanP55066 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NcanP55066 Sim1-201ENSMUST00000020071 7355 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NcanP55066 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
NcanP55066 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
NcanP55066 Lipe-203ENSMUST00000105177 1251 ntBASIC7.31□□□□□ -1.24
NcanP55066 Gm13579-201ENSMUST00000118519 517 ntBASIC7.31□□□□□ -1.24
NcanP55066 Gm12135-201ENSMUST00000119170 466 ntBASIC7.31□□□□□ -1.24
NcanP55066 Gm12630-201ENSMUST00000121575 784 ntBASIC7.31□□□□□ -1.24
NcanP55066 Calr-ps-201ENSMUST00000121776 485 ntBASIC7.31□□□□□ -1.24
NcanP55066 Gm22275-201ENSMUST00000122470 310 ntBASIC7.31□□□□□ -1.24
NcanP55066 Gm22024-201ENSMUST00000122733 287 ntBASIC7.31□□□□□ -1.24
NcanP55066 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NcanP55066 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC7.31□□□□□ -1.24
NcanP55066 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NcanP55066 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC7.31□□□□□ -1.24
NcanP55066 Gm22262-201ENSMUST00000158713 86 ntBASIC7.31□□□□□ -1.24
NcanP55066 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
NcanP55066 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC7.31□□□□□ -1.24
NcanP55066 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NcanP55066 Mir6975-201ENSMUST00000184879 61 ntBASIC7.31□□□□□ -1.24
NcanP55066 Gm29159-201ENSMUST00000187969 379 ntBASIC7.31□□□□□ -1.24
NcanP55066 Gm28883-201ENSMUST00000189256 369 ntBASIC7.31□□□□□ -1.24
NcanP55066 Gm37358-201ENSMUST00000195492 479 ntBASIC7.31□□□□□ -1.24
NcanP55066 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC7.31□□□□□ -1.24
NcanP55066 Gm45432-201ENSMUST00000210391 416 ntBASIC7.31□□□□□ -1.24
NcanP55066 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC7.31□□□□□ -1.24
NcanP55066 Gm5182-201ENSMUST00000217708 6092 ntBASIC7.31□□□□□ -1.24
NcanP55066 Nolc1-203ENSMUST00000223728 3523 ntAPPRIS ALT2 BASIC7.31□□□□□ -1.24
NcanP55066 AC123656.1-201ENSMUST00000227121 581 ntBASIC7.31□□□□□ -1.24
NcanP55066 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC7.31□□□□□ -1.24
NcanP55066 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NcanP55066 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
NcanP55066 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
NcanP55066 Gm10650-202ENSMUST00000196581 1969 ntBASIC7.31□□□□□ -1.24
NcanP55066 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NcanP55066 Gm19031-201ENSMUST00000176280 1365 ntBASIC7.31□□□□□ -1.24
NcanP55066 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NcanP55066 Gm18632-201ENSMUST00000222597 2087 ntBASIC7.31□□□□□ -1.24
NcanP55066 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC7.31□□□□□ -1.24
NcanP55066 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
NcanP55066 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
NcanP55066 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
NcanP55066 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
NcanP55066 Gm42996-201ENSMUST00000196116 1636 ntBASIC7.3□□□□□ -1.24
NcanP55066 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
NcanP55066 Arhgef9-205ENSMUST00000113883 5399 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
NcanP55066 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NcanP55066 Pdzd2-201ENSMUST00000075317 10756 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
NcanP55066 Inpp5d-211ENSMUST00000170300 3942 ntTSL 2 BASIC7.3□□□□□ -1.24
NcanP55066 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NcanP55066 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
NcanP55066 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NcanP55066 Gm6866-201ENSMUST00000188559 2549 ntBASIC7.3□□□□□ -1.24
NcanP55066 Pum1-205ENSMUST00000105992 5058 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NcanP55066 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
NcanP55066 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
NcanP55066 Sc5d-201ENSMUST00000052725 4787 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
NcanP55066 Gm15209-201ENSMUST00000117703 400 ntBASIC7.3□□□□□ -1.24
NcanP55066 Gm12262-201ENSMUST00000119915 305 ntBASIC7.3□□□□□ -1.24
NcanP55066 Gm11343-201ENSMUST00000120579 599 ntBASIC7.3□□□□□ -1.24
NcanP55066 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC7.3□□□□□ -1.24
NcanP55066 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
NcanP55066 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NcanP55066 Gm20491-201ENSMUST00000173765 1241 ntBASIC7.3□□□□□ -1.24
NcanP55066 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC7.3□□□□□ -1.24
NcanP55066 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC7.3□□□□□ -1.24
NcanP55066 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC7.3□□□□□ -1.24
NcanP55066 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NcanP55066 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC7.3□□□□□ -1.24
NcanP55066 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
NcanP55066 Gm5324-201ENSMUST00000208115 476 ntBASIC7.3□□□□□ -1.24
NcanP55066 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
NcanP55066 AC123832.2-201ENSMUST00000215151 129 ntBASIC7.3□□□□□ -1.24
NcanP55066 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NcanP55066 Gm46192-201ENSMUST00000217894 326 ntBASIC7.3□□□□□ -1.24
NcanP55066 Gm46203-201ENSMUST00000218130 478 ntBASIC7.3□□□□□ -1.24
NcanP55066 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC7.3□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms