Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Nub1P54729 Gm28150-201ENSMUST00000187305 614 ntBASIC8.05□□□□□ -1.12
Nub1P54729 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC8.05□□□□□ -1.12
Nub1P54729 Gm28377-201ENSMUST00000189695 720 ntBASIC8.05□□□□□ -1.12
Nub1P54729 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC8.05□□□□□ -1.12
Nub1P54729 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Nub1P54729 Gm43590-201ENSMUST00000195987 387 ntBASIC8.05□□□□□ -1.12
Nub1P54729 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC8.05□□□□□ -1.12
Nub1P54729 Gm43005-201ENSMUST00000199015 648 ntBASIC8.05□□□□□ -1.12
Nub1P54729 Gm43226-201ENSMUST00000202438 259 ntBASIC8.05□□□□□ -1.12
Nub1P54729 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC8.05□□□□□ -1.12
Nub1P54729 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Nub1P54729 Gm8667-201ENSMUST00000211112 449 ntBASIC8.05□□□□□ -1.12
Nub1P54729 AC153801.1-201ENSMUST00000217904 947 ntBASIC8.05□□□□□ -1.12
Nub1P54729 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC8.05□□□□□ -1.12
Nub1P54729 AC132384.13-201ENSMUST00000219556 1159 ntBASIC8.05□□□□□ -1.12
Nub1P54729 CT030184.2-201ENSMUST00000223064 263 ntBASIC8.05□□□□□ -1.12
Nub1P54729 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC8.05□□□□□ -1.12
Nub1P54729 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Nub1P54729 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Nub1P54729 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Nub1P54729 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC8.05□□□□□ -1.12
Nub1P54729 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Nub1P54729 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC8.05□□□□□ -1.12
Nub1P54729 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Nub1P54729 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Nub1P54729 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC8.05□□□□□ -1.12
Nub1P54729 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Nub1P54729 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Nub1P54729 Gm18491-201ENSMUST00000192492 1594 ntBASIC8.05□□□□□ -1.12
Nub1P54729 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Nub1P54729 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Nub1P54729 Strbp-202ENSMUST00000072186 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Nub1P54729 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Nub1P54729 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Nub1P54729 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Nub1P54729 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC8.04□□□□□ -1.12
Nub1P54729 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Nub1P54729 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Nub1P54729 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Nub1P54729 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Nub1P54729 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Nub1P54729 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Nub1P54729 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Nub1P54729 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Nub1P54729 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Nub1P54729 AC131667.1-201ENSMUST00000214665 2175 ntBASIC8.04□□□□□ -1.12
Nub1P54729 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Nub1P54729 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Nub1P54729 Gm18957-201ENSMUST00000197623 1813 ntBASIC8.04□□□□□ -1.12
Nub1P54729 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Nub1P54729 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Nub1P54729 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC8.04□□□□□ -1.12
Nub1P54729 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
Nub1P54729 Gm14932-201ENSMUST00000117112 453 ntBASIC8.04□□□□□ -1.12
Nub1P54729 Gm11858-201ENSMUST00000117935 838 ntBASIC8.04□□□□□ -1.12
Nub1P54729 Gm16418-201ENSMUST00000118577 171 ntBASIC8.04□□□□□ -1.12
Nub1P54729 Gm12988-201ENSMUST00000119054 478 ntBASIC8.04□□□□□ -1.12
Nub1P54729 Gm12219-201ENSMUST00000119198 443 ntBASIC8.04□□□□□ -1.12
Nub1P54729 Gm11407-201ENSMUST00000120362 1058 ntBASIC8.04□□□□□ -1.12
Nub1P54729 Gm14848-201ENSMUST00000121850 467 ntBASIC8.04□□□□□ -1.12
Nub1P54729 Gm11688-201ENSMUST00000122145 308 ntBASIC8.04□□□□□ -1.12
Nub1P54729 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Nub1P54729 Prkag2os1-201ENSMUST00000134633 991 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Nub1P54729 Gm14710-201ENSMUST00000146082 1066 ntBASIC8.04□□□□□ -1.12
Nub1P54729 Gm24011-201ENSMUST00000157732 268 ntBASIC8.04□□□□□ -1.12
Nub1P54729 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC8.04□□□□□ -1.12
Nub1P54729 Gm24754-201ENSMUST00000177997 107 ntBASIC8.04□□□□□ -1.12
Nub1P54729 Gm26784-201ENSMUST00000181666 410 ntBASIC8.04□□□□□ -1.12
Nub1P54729 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Nub1P54729 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC8.04□□□□□ -1.12
Nub1P54729 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Nub1P54729 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC8.04□□□□□ -1.12
Nub1P54729 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC8.04□□□□□ -1.12
Nub1P54729 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Nub1P54729 Klra13-ps-203ENSMUST00000204367 850 ntBASIC8.04□□□□□ -1.12
Nub1P54729 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Nub1P54729 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Nub1P54729 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Nub1P54729 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC8.04□□□□□ -1.12
Nub1P54729 Gm45608-201ENSMUST00000210948 389 ntBASIC8.04□□□□□ -1.12
Nub1P54729 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Nub1P54729 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC8.04□□□□□ -1.12
Nub1P54729 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC8.04□□□□□ -1.12
Nub1P54729 AC069561.2-201ENSMUST00000217596 420 ntBASIC8.04□□□□□ -1.12
Nub1P54729 AC154552.5-201ENSMUST00000222352 207 ntBASIC8.04□□□□□ -1.12
Nub1P54729 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Nub1P54729 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Nub1P54729 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Nub1P54729 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Nub1P54729 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Nub1P54729 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Nub1P54729 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC8.04□□□□□ -1.12
Nub1P54729 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Nub1P54729 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Nub1P54729 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Nub1P54729 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Nub1P54729 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Nub1P54729 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Nub1P54729 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms