Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Card6-201ENSMUST00000118365 5995 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Cux1P53564 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Cux1P53564 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Cux1P53564 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC10.31□□□□□ -0.76
Cux1P53564 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cux1P53564 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cux1P53564 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC10.31□□□□□ -0.76
Cux1P53564 Gm14762-201ENSMUST00000105109 1771 ntBASIC10.31□□□□□ -0.76
Cux1P53564 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cux1P53564 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cux1P53564 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cux1P53564 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cux1P53564 Gm37772-201ENSMUST00000191635 1394 ntBASIC10.3□□□□□ -0.76
Cux1P53564 AC140393.3-201ENSMUST00000228396 1352 ntBASIC10.3□□□□□ -0.76
Cux1P53564 Gm43728-201ENSMUST00000198817 2622 ntBASIC10.3□□□□□ -0.76
Cux1P53564 AC125409.2-201ENSMUST00000221888 2158 ntBASIC10.3□□□□□ -0.76
Cux1P53564 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cux1P53564 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Cux1P53564 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Cux1P53564 Tanc1-208ENSMUST00000139863 7246 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cux1P53564 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cux1P53564 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cux1P53564 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Cux1P53564 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC10.3□□□□□ -0.76
Cux1P53564 Gm15332-201ENSMUST00000118386 357 ntBASIC10.3□□□□□ -0.76
Cux1P53564 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cux1P53564 Gm17044-201ENSMUST00000168549 828 ntBASIC10.3□□□□□ -0.76
Cux1P53564 Mir5110-201ENSMUST00000175537 87 ntBASIC10.3□□□□□ -0.76
Cux1P53564 Gm9529-201ENSMUST00000177598 579 ntBASIC10.3□□□□□ -0.76
Cux1P53564 Gm20778-201ENSMUST00000178524 627 ntBASIC10.3□□□□□ -0.76
Cux1P53564 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC10.3□□□□□ -0.76
Cux1P53564 Gm37784-201ENSMUST00000193233 189 ntBASIC10.3□□□□□ -0.76
Cux1P53564 Gm4332-201ENSMUST00000196114 346 ntBASIC10.3□□□□□ -0.76
Cux1P53564 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC10.3□□□□□ -0.76
Cux1P53564 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC10.3□□□□□ -0.76
Cux1P53564 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cux1P53564 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC10.3□□□□□ -0.76
Cux1P53564 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cux1P53564 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cux1P53564 Zfp180-201ENSMUST00000068975 3901 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cux1P53564 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Cux1P53564 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cux1P53564 Gm38284-201ENSMUST00000194803 4539 ntBASIC10.3□□□□□ -0.76
Cux1P53564 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC10.3□□□□□ -0.76
Cux1P53564 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC10.3□□□□□ -0.76
Cux1P53564 AC164978.1-201ENSMUST00000228608 4011 ntBASIC10.29□□□□□ -0.76
Cux1P53564 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Cux1P53564 Nrp2-206ENSMUST00000114157 6357 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cux1P53564 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Cux1P53564 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC10.29□□□□□ -0.76
Cux1P53564 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cux1P53564 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cux1P53564 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC10.29□□□□□ -0.76
Cux1P53564 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Cux1P53564 Sept3-201ENSMUST00000023095 4731 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cux1P53564 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC10.29□□□□□ -0.76
Cux1P53564 Gm7058-201ENSMUST00000119209 902 ntBASIC10.29□□□□□ -0.76
Cux1P53564 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cux1P53564 Gm22820-201ENSMUST00000157205 329 ntBASIC10.29□□□□□ -0.76
Cux1P53564 Gm22210-201ENSMUST00000158101 144 ntBASIC10.29□□□□□ -0.76
Cux1P53564 Gm23225-201ENSMUST00000158121 114 ntBASIC10.29□□□□□ -0.76
Cux1P53564 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC10.29□□□□□ -0.76
Cux1P53564 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cux1P53564 Ighv1-27-201ENSMUST00000194473 340 ntBASIC10.29□□□□□ -0.76
Cux1P53564 Igkv12-67-201ENSMUST00000197806 354 ntBASIC10.29□□□□□ -0.76
Cux1P53564 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cux1P53564 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Cux1P53564 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cux1P53564 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cux1P53564 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC10.29□□□□□ -0.76
Cux1P53564 Gm28667-201ENSMUST00000189873 2171 ntBASIC10.29□□□□□ -0.76
Cux1P53564 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cux1P53564 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cux1P53564 Clasp1-218ENSMUST00000190571 7910 ntAPPRIS P5 TSL 5 BASIC10.28□□□□□ -0.76
Cux1P53564 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cux1P53564 Gm14870-201ENSMUST00000118414 156 ntBASIC10.28□□□□□ -0.76
Cux1P53564 Gm24733-201ENSMUST00000158863 253 ntBASIC10.28□□□□□ -0.76
Cux1P53564 Gm3076-201ENSMUST00000161613 451 ntBASIC10.28□□□□□ -0.76
Cux1P53564 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC10.28□□□□□ -0.76
Cux1P53564 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cux1P53564 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC10.28□□□□□ -0.76
Cux1P53564 n-TStga1-201ENSMUST00000199903 109 ntBASIC10.28□□□□□ -0.76
Cux1P53564 Gm45127-201ENSMUST00000205984 1015 ntBASIC10.28□□□□□ -0.76
Cux1P53564 AC154634.2-201ENSMUST00000225983 1184 ntBASIC10.28□□□□□ -0.76
Cux1P53564 AC125117.2-201ENSMUST00000228344 1140 ntBASIC10.28□□□□□ -0.76
Cux1P53564 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Cux1P53564 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Cux1P53564 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Cux1P53564 Hpgds-201ENSMUST00000031982 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cux1P53564 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cux1P53564 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
Cux1P53564 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cux1P53564 Vmn1r199-202ENSMUST00000227685 5713 ntAPPRIS P2 BASIC10.28□□□□□ -0.76
Cux1P53564 Bcat1-201ENSMUST00000032402 7833 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cux1P53564 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC10.28□□□□□ -0.76
Cux1P53564 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC10.28□□□□□ -0.76
Cux1P53564 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cux1P53564 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cux1P53564 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cux1P53564 Dlg2-201ENSMUST00000074273 5278 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms