Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
LtbrP50284 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LtbrP50284 Synj2-208ENSMUST00000115789 5130 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
LtbrP50284 Tmcc1-209ENSMUST00000173548 1622 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
LtbrP50284 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LtbrP50284 Gm15095-201ENSMUST00000118996 1430 ntBASIC9.43□□□□□ -0.9
LtbrP50284 Atp6v1a-202ENSMUST00000114666 4234 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
LtbrP50284 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LtbrP50284 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
LtbrP50284 Igkv3-4-201ENSMUST00000103401 360 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
LtbrP50284 Gm9427-201ENSMUST00000116187 651 ntBASIC9.43□□□□□ -0.9
LtbrP50284 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC9.43□□□□□ -0.9
LtbrP50284 Gm12837-201ENSMUST00000120131 373 ntBASIC9.43□□□□□ -0.9
LtbrP50284 Hmgn2-ps1-201ENSMUST00000120716 279 ntBASIC9.43□□□□□ -0.9
LtbrP50284 Gm15009-201ENSMUST00000121387 322 ntBASIC9.43□□□□□ -0.9
LtbrP50284 Gm3757-201ENSMUST00000125878 675 ntBASIC9.43□□□□□ -0.9
LtbrP50284 Gm22158-201ENSMUST00000158411 126 ntBASIC9.43□□□□□ -0.9
LtbrP50284 Gm24225-201ENSMUST00000158825 98 ntBASIC9.43□□□□□ -0.9
LtbrP50284 Gm3513-201ENSMUST00000161319 637 ntTSL 3 BASIC9.43□□□□□ -0.9
LtbrP50284 U2af1l4-204ENSMUST00000163464 651 ntTSL 5 BASIC9.43□□□□□ -0.9
LtbrP50284 Gm8540-201ENSMUST00000168952 732 ntBASIC9.43□□□□□ -0.9
LtbrP50284 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC9.43□□□□□ -0.9
LtbrP50284 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC9.43□□□□□ -0.9
LtbrP50284 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
LtbrP50284 Gm10182-201ENSMUST00000178676 273 ntBASIC9.43□□□□□ -0.9
LtbrP50284 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
LtbrP50284 Gm18185-201ENSMUST00000186725 667 ntBASIC9.43□□□□□ -0.9
LtbrP50284 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LtbrP50284 Gm28956-201ENSMUST00000189047 427 ntBASIC9.43□□□□□ -0.9
LtbrP50284 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC9.43□□□□□ -0.9
LtbrP50284 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC9.43□□□□□ -0.9
LtbrP50284 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC9.43□□□□□ -0.9
LtbrP50284 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC9.43□□□□□ -0.9
LtbrP50284 Gm42804-201ENSMUST00000199701 178 ntBASIC9.43□□□□□ -0.9
LtbrP50284 Gm43224-201ENSMUST00000201567 898 ntBASIC9.43□□□□□ -0.9
LtbrP50284 Gm18215-201ENSMUST00000204429 798 ntBASIC9.43□□□□□ -0.9
LtbrP50284 Gm43922-201ENSMUST00000205071 328 ntBASIC9.43□□□□□ -0.9
LtbrP50284 Gm44982-201ENSMUST00000208795 471 ntBASIC9.43□□□□□ -0.9
LtbrP50284 Gm19219-201ENSMUST00000215863 724 ntBASIC9.43□□□□□ -0.9
LtbrP50284 Gm17875-201ENSMUST00000216005 941 ntBASIC9.43□□□□□ -0.9
LtbrP50284 Gm3565-201ENSMUST00000222670 609 ntBASIC9.43□□□□□ -0.9
LtbrP50284 Diaph3-204ENSMUST00000226254 682 ntBASIC9.43□□□□□ -0.9
LtbrP50284 AC102676.1-201ENSMUST00000228131 719 ntBASIC9.43□□□□□ -0.9
LtbrP50284 AC122035.2-201ENSMUST00000228698 462 ntBASIC9.43□□□□□ -0.9
LtbrP50284 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
LtbrP50284 Myo1f-201ENSMUST00000087605 3819 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
LtbrP50284 Gm23516-201ENSMUST00000093728 107 ntBASIC9.43□□□□□ -0.9
LtbrP50284 Baz2a-202ENSMUST00000170054 8372 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
LtbrP50284 Baz2a-201ENSMUST00000045621 8369 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
LtbrP50284 Eps15l1-205ENSMUST00000212590 3376 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LtbrP50284 Musk-205ENSMUST00000102893 3323 ntTSL 5 BASIC9.43□□□□□ -0.9
LtbrP50284 Clasp1-205ENSMUST00000185405 4597 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
LtbrP50284 Bbs7-202ENSMUST00000108155 2437 ntTSL 5 BASIC9.43□□□□□ -0.9
LtbrP50284 Fam198b-201ENSMUST00000029567 6627 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
LtbrP50284 Med12-202ENSMUST00000087956 6746 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
LtbrP50284 Cdh26-201ENSMUST00000042092 2891 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
LtbrP50284 Gm16436-201ENSMUST00000121510 1607 ntBASIC9.42□□□□□ -0.9
LtbrP50284 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC9.42□□□□□ -0.9
LtbrP50284 Ryr1-201ENSMUST00000032813 15352 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
LtbrP50284 Lrrc1-201ENSMUST00000113421 2630 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
LtbrP50284 Gm43411-201ENSMUST00000196235 1579 ntBASIC9.42□□□□□ -0.9
LtbrP50284 Uhrf1-201ENSMUST00000001258 3586 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
LtbrP50284 Gm37630-201ENSMUST00000194210 1456 ntBASIC9.42□□□□□ -0.9
LtbrP50284 Gm8798-202ENSMUST00000213048 2357 ntTSL 5 BASIC9.42□□□□□ -0.9
LtbrP50284 AC166341.5-201ENSMUST00000222206 1400 ntBASIC9.42□□□□□ -0.9
LtbrP50284 Ablim3-202ENSMUST00000166783 4213 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LtbrP50284 Wfdc5-201ENSMUST00000045127 2322 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LtbrP50284 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
LtbrP50284 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC9.42□□□□□ -0.9
LtbrP50284 Gm44013-201ENSMUST00000204392 2262 ntBASIC9.42□□□□□ -0.9
LtbrP50284 AC155270.1-201ENSMUST00000221626 4028 ntBASIC9.42□□□□□ -0.9
LtbrP50284 Glt8d2-201ENSMUST00000020485 2153 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LtbrP50284 Fam83b-202ENSMUST00000183437 3879 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LtbrP50284 Snord116l9-201ENSMUST00000101891 94 ntBASIC9.42□□□□□ -0.9
LtbrP50284 Gm26504-201ENSMUST00000102033 94 ntBASIC9.42□□□□□ -0.9
LtbrP50284 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC9.42□□□□□ -0.9
LtbrP50284 Gm22072-201ENSMUST00000116850 121 ntBASIC9.42□□□□□ -0.9
LtbrP50284 Gm13156-201ENSMUST00000118348 321 ntBASIC9.42□□□□□ -0.9
LtbrP50284 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
LtbrP50284 Gm14293-201ENSMUST00000118528 577 ntBASIC9.42□□□□□ -0.9
LtbrP50284 Gm13633-201ENSMUST00000120668 898 ntBASIC9.42□□□□□ -0.9
LtbrP50284 Gm14125-202ENSMUST00000120921 756 ntBASIC9.42□□□□□ -0.9
LtbrP50284 Gm15157-201ENSMUST00000121852 702 ntBASIC9.42□□□□□ -0.9
LtbrP50284 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
LtbrP50284 Gm25372-201ENSMUST00000158161 255 ntBASIC9.42□□□□□ -0.9
LtbrP50284 Gm24682-201ENSMUST00000158764 137 ntBASIC9.42□□□□□ -0.9
LtbrP50284 Gm16236-201ENSMUST00000159588 379 ntBASIC9.42□□□□□ -0.9
LtbrP50284 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
LtbrP50284 Gm18779-201ENSMUST00000173444 577 ntBASIC9.42□□□□□ -0.9
LtbrP50284 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
LtbrP50284 Gm22258-201ENSMUST00000177645 94 ntBASIC9.42□□□□□ -0.9
LtbrP50284 Gm26502-201ENSMUST00000177732 94 ntBASIC9.42□□□□□ -0.9
LtbrP50284 Snord116l13-201ENSMUST00000177737 94 ntBASIC9.42□□□□□ -0.9
LtbrP50284 Gm25350-201ENSMUST00000177849 94 ntBASIC9.42□□□□□ -0.9
LtbrP50284 Snord116l15-201ENSMUST00000177940 94 ntBASIC9.42□□□□□ -0.9
LtbrP50284 Gm23446-201ENSMUST00000177977 94 ntBASIC9.42□□□□□ -0.9
LtbrP50284 Snord116l4-201ENSMUST00000177982 94 ntBASIC9.42□□□□□ -0.9
LtbrP50284 Gm26201-201ENSMUST00000178047 94 ntBASIC9.42□□□□□ -0.9
LtbrP50284 Gm24711-201ENSMUST00000178062 94 ntBASIC9.42□□□□□ -0.9
LtbrP50284 Gm24609-201ENSMUST00000178166 94 ntBASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms