Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm6321-201ENSMUST00000194460 1090 ntBASIC8.65□□□□□ -1.02
Rfx1P48377 Gm42932-201ENSMUST00000197280 744 ntBASIC8.65□□□□□ -1.02
Rfx1P48377 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Rfx1P48377 Gm43040-201ENSMUST00000202399 558 ntBASIC8.65□□□□□ -1.02
Rfx1P48377 Gm5723-201ENSMUST00000203096 432 ntBASIC8.65□□□□□ -1.02
Rfx1P48377 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC8.65□□□□□ -1.02
Rfx1P48377 Gm18689-201ENSMUST00000203969 902 ntBASIC8.65□□□□□ -1.02
Rfx1P48377 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC8.65□□□□□ -1.02
Rfx1P48377 Fxyd4-208ENSMUST00000204950 586 ntTSL 3 BASIC8.65□□□□□ -1.02
Rfx1P48377 Gm33926-201ENSMUST00000208755 357 ntTSL 2 BASIC8.65□□□□□ -1.02
Rfx1P48377 AC158799.1-201ENSMUST00000214686 617 ntTSL 5 BASIC8.65□□□□□ -1.02
Rfx1P48377 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Rfx1P48377 4930471E19Rik-202ENSMUST00000219150 737 ntTSL 3 BASIC8.65□□□□□ -1.02
Rfx1P48377 AC153526.1-201ENSMUST00000219750 190 ntBASIC8.65□□□□□ -1.02
Rfx1P48377 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Rfx1P48377 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Rfx1P48377 Dmrtc1c2-202ENSMUST00000087899 717 ntAPPRIS P3 TSL 5 BASIC8.65□□□□□ -1.02
Rfx1P48377 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Rfx1P48377 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
Rfx1P48377 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Rfx1P48377 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC8.65□□□□□ -1.03
Rfx1P48377 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Rfx1P48377 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Rfx1P48377 Tsga10-208ENSMUST00000193669 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rfx1P48377 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rfx1P48377 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rfx1P48377 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rfx1P48377 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rfx1P48377 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Rfx1P48377 AC149294.7-201ENSMUST00000227475 1432 ntBASIC8.64□□□□□ -1.03
Rfx1P48377 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rfx1P48377 AC156636.1-201ENSMUST00000218639 2229 ntBASIC8.64□□□□□ -1.03
Rfx1P48377 Gm26856-201ENSMUST00000181919 1349 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rfx1P48377 AC154552.6-201ENSMUST00000221365 1342 ntBASIC8.64□□□□□ -1.03
Rfx1P48377 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
Rfx1P48377 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rfx1P48377 Gm41-201ENSMUST00000116183 1023 ntBASIC8.64□□□□□ -1.03
Rfx1P48377 Gm7785-201ENSMUST00000117121 892 ntBASIC8.64□□□□□ -1.03
Rfx1P48377 Gm12034-201ENSMUST00000119032 399 ntBASIC8.64□□□□□ -1.03
Rfx1P48377 Gm13221-201ENSMUST00000121712 430 ntBASIC8.64□□□□□ -1.03
Rfx1P48377 Gm26424-201ENSMUST00000122530 104 ntBASIC8.64□□□□□ -1.03
Rfx1P48377 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC8.64□□□□□ -1.03
Rfx1P48377 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rfx1P48377 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rfx1P48377 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC8.64□□□□□ -1.03
Rfx1P48377 Gm9399-201ENSMUST00000175771 639 ntBASIC8.64□□□□□ -1.03
Rfx1P48377 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Rfx1P48377 Gm25120-201ENSMUST00000180148 79 ntBASIC8.64□□□□□ -1.03
Rfx1P48377 Gm5445-201ENSMUST00000180224 480 ntBASIC8.64□□□□□ -1.03
Rfx1P48377 Gm38181-201ENSMUST00000181357 720 ntBASIC8.64□□□□□ -1.03
Rfx1P48377 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC8.64□□□□□ -1.03
Rfx1P48377 Gm36928-201ENSMUST00000192466 694 ntBASIC8.64□□□□□ -1.03
Rfx1P48377 Gm7804-201ENSMUST00000192784 738 ntTSL 5 BASIC8.64□□□□□ -1.03
Rfx1P48377 Gm37325-201ENSMUST00000194971 694 ntBASIC8.64□□□□□ -1.03
Rfx1P48377 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC8.64□□□□□ -1.03
Rfx1P48377 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC8.64□□□□□ -1.03
Rfx1P48377 Gm43542-201ENSMUST00000199505 379 ntBASIC8.64□□□□□ -1.03
Rfx1P48377 Gm42976-201ENSMUST00000200313 222 ntBASIC8.64□□□□□ -1.03
Rfx1P48377 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC8.64□□□□□ -1.03
Rfx1P48377 Gm44451-201ENSMUST00000203767 483 ntBASIC8.64□□□□□ -1.03
Rfx1P48377 Gm9240-201ENSMUST00000206527 742 ntBASIC8.64□□□□□ -1.03
Rfx1P48377 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC8.64□□□□□ -1.03
Rfx1P48377 Gm35501-201ENSMUST00000213492 783 ntTSL 2 BASIC8.64□□□□□ -1.03
Rfx1P48377 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC8.64□□□□□ -1.03
Rfx1P48377 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC8.64□□□□□ -1.03
Rfx1P48377 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Rfx1P48377 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC8.64□□□□□ -1.03
Rfx1P48377 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC8.64□□□□□ -1.03
Rfx1P48377 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rfx1P48377 CT010462.1-201ENSMUST00000220554 1200 ntTSL 5 BASIC8.64□□□□□ -1.03
Rfx1P48377 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC8.64□□□□□ -1.03
Rfx1P48377 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC8.64□□□□□ -1.03
Rfx1P48377 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC8.64□□□□□ -1.03
Rfx1P48377 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Rfx1P48377 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Rfx1P48377 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Rfx1P48377 Olfr1497-202ENSMUST00000217384 1672 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Rfx1P48377 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC8.64□□□□□ -1.03
Rfx1P48377 AC122346.1-201ENSMUST00000225266 3732 ntBASIC8.64□□□□□ -1.03
Rfx1P48377 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rfx1P48377 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Rfx1P48377 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rfx1P48377 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC8.64□□□□□ -1.03
Rfx1P48377 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rfx1P48377 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC8.64□□□□□ -1.03
Rfx1P48377 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rfx1P48377 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rfx1P48377 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC8.64□□□□□ -1.03
Rfx1P48377 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rfx1P48377 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC8.63□□□□□ -1.03
Rfx1P48377 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC8.63□□□□□ -1.03
Rfx1P48377 Gm37216-201ENSMUST00000193817 3478 ntBASIC8.63□□□□□ -1.03
Rfx1P48377 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC8.63□□□□□ -1.03
Rfx1P48377 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Rfx1P48377 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rfx1P48377 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC8.63□□□□□ -1.03
Rfx1P48377 Gm43062-201ENSMUST00000196302 1319 ntBASIC8.63□□□□□ -1.03
Rfx1P48377 AC153143.1-201ENSMUST00000222966 1340 ntBASIC8.63□□□□□ -1.03
Rfx1P48377 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Rfx1P48377 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms