Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm33167-201ENSMUST00000201933 2643 ntBASIC6.34□□□□□ -1.39
Sox6P40645 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Sox6P40645 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC6.34□□□□□ -1.39
Sox6P40645 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC6.34□□□□□ -1.39
Sox6P40645 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC6.34□□□□□ -1.39
Sox6P40645 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Sox6P40645 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
Sox6P40645 Gm37863-201ENSMUST00000194911 1457 ntBASIC6.34□□□□□ -1.4
Sox6P40645 Gm42975-201ENSMUST00000200612 1491 ntBASIC6.34□□□□□ -1.4
Sox6P40645 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
Sox6P40645 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Sox6P40645 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC6.34□□□□□ -1.4
Sox6P40645 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sox6P40645 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sox6P40645 Gm7961-201ENSMUST00000201338 1436 ntBASIC6.33□□□□□ -1.4
Sox6P40645 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Sox6P40645 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC6.33□□□□□ -1.4
Sox6P40645 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sox6P40645 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sox6P40645 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sox6P40645 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sox6P40645 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sox6P40645 Gm22707-201ENSMUST00000103834 110 ntBASIC6.33□□□□□ -1.4
Sox6P40645 Gm25311-201ENSMUST00000104136 132 ntBASIC6.33□□□□□ -1.4
Sox6P40645 Gm23527-201ENSMUST00000104570 130 ntBASIC6.33□□□□□ -1.4
Sox6P40645 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Sox6P40645 Gm17184-201ENSMUST00000111864 462 ntBASIC6.33□□□□□ -1.4
Sox6P40645 Gm11263-201ENSMUST00000121853 749 ntBASIC6.33□□□□□ -1.4
Sox6P40645 n-R5s48-201ENSMUST00000122482 110 ntBASIC6.33□□□□□ -1.4
Sox6P40645 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC6.33□□□□□ -1.4
Sox6P40645 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sox6P40645 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sox6P40645 Gm17212-201ENSMUST00000166666 259 ntBASIC6.33□□□□□ -1.4
Sox6P40645 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Sox6P40645 Gm22569-201ENSMUST00000175545 124 ntBASIC6.33□□□□□ -1.4
Sox6P40645 Gm23139-201ENSMUST00000179454 132 ntBASIC6.33□□□□□ -1.4
Sox6P40645 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sox6P40645 Gm27596-201ENSMUST00000185061 83 ntBASIC6.33□□□□□ -1.4
Sox6P40645 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC6.33□□□□□ -1.4
Sox6P40645 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC6.33□□□□□ -1.4
Sox6P40645 Gm18875-201ENSMUST00000188563 882 ntBASIC6.33□□□□□ -1.4
Sox6P40645 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sox6P40645 Gm37270-201ENSMUST00000194277 330 ntBASIC6.33□□□□□ -1.4
Sox6P40645 Ighv8-15-201ENSMUST00000197770 294 ntBASIC6.33□□□□□ -1.4
Sox6P40645 Gm44823-201ENSMUST00000204775 1107 ntBASIC6.33□□□□□ -1.4
Sox6P40645 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Sox6P40645 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sox6P40645 Gm4247-201ENSMUST00000211441 1042 ntBASIC6.33□□□□□ -1.4
Sox6P40645 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sox6P40645 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sox6P40645 AC131654.1-201ENSMUST00000219675 745 ntBASIC6.33□□□□□ -1.4
Sox6P40645 Gm46424-201ENSMUST00000221567 168 ntBASIC6.33□□□□□ -1.4
Sox6P40645 Gm10126-201ENSMUST00000221732 168 ntBASIC6.33□□□□□ -1.4
Sox6P40645 Gm19238-201ENSMUST00000221936 1260 ntBASIC6.33□□□□□ -1.4
Sox6P40645 CT030184.2-201ENSMUST00000223064 263 ntBASIC6.33□□□□□ -1.4
Sox6P40645 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sox6P40645 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sox6P40645 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sox6P40645 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sox6P40645 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
Sox6P40645 Gm43363-201ENSMUST00000201590 2647 ntBASIC6.33□□□□□ -1.4
Sox6P40645 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Sox6P40645 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC6.33□□□□□ -1.4
Sox6P40645 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sox6P40645 AC130661.1-201ENSMUST00000218248 1680 ntBASIC6.33□□□□□ -1.4
Sox6P40645 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sox6P40645 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sox6P40645 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC6.32□□□□□ -1.4
Sox6P40645 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC6.32□□□□□ -1.4
Sox6P40645 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sox6P40645 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC6.32□□□□□ -1.4
Sox6P40645 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Sox6P40645 Gm45786-201ENSMUST00000213021 2278 ntBASIC6.32□□□□□ -1.4
Sox6P40645 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox6P40645 Gm16123-201ENSMUST00000118647 1517 ntBASIC6.32□□□□□ -1.4
Sox6P40645 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sox6P40645 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox6P40645 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox6P40645 Gm15048-201ENSMUST00000118201 954 ntBASIC6.32□□□□□ -1.4
Sox6P40645 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC6.32□□□□□ -1.4
Sox6P40645 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC6.32□□□□□ -1.4
Sox6P40645 Gm12903-201ENSMUST00000121015 544 ntBASIC6.32□□□□□ -1.4
Sox6P40645 Gm23031-201ENSMUST00000157998 119 ntBASIC6.32□□□□□ -1.4
Sox6P40645 Gm4956-202ENSMUST00000178869 672 ntBASIC6.32□□□□□ -1.4
Sox6P40645 Gm8192-201ENSMUST00000182196 958 ntBASIC6.32□□□□□ -1.4
Sox6P40645 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox6P40645 Gm29072-201ENSMUST00000191149 678 ntBASIC6.32□□□□□ -1.4
Sox6P40645 Gm37669-201ENSMUST00000192184 820 ntBASIC6.32□□□□□ -1.4
Sox6P40645 Gm7512-201ENSMUST00000195217 1170 ntBASIC6.32□□□□□ -1.4
Sox6P40645 Gm6077-201ENSMUST00000196008 499 ntBASIC6.32□□□□□ -1.4
Sox6P40645 Gm3511-201ENSMUST00000199823 204 ntBASIC6.32□□□□□ -1.4
Sox6P40645 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sox6P40645 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox6P40645 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Sox6P40645 Gm24405-201ENSMUST00000083033 167 ntBASIC6.32□□□□□ -1.4
Sox6P40645 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox6P40645 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC6.32□□□□□ -1.4
Sox6P40645 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Sox6P40645 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sox6P40645 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms