Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col2a1P28481 Gm43557-201ENSMUST00000197100 2370 ntBASIC7.64□□□□□ -1.19
Col2a1P28481 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
Col2a1P28481 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC7.64□□□□□ -1.19
Col2a1P28481 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Col2a1P28481 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC7.64□□□□□ -1.19
Col2a1P28481 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC7.64□□□□□ -1.19
Col2a1P28481 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Col2a1P28481 Gm22820-201ENSMUST00000157205 329 ntBASIC7.64□□□□□ -1.19
Col2a1P28481 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC7.64□□□□□ -1.19
Col2a1P28481 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC7.64□□□□□ -1.19
Col2a1P28481 Gm37289-201ENSMUST00000195409 1402 ntBASIC7.64□□□□□ -1.19
Col2a1P28481 Gm2602-201ENSMUST00000202112 571 ntBASIC7.64□□□□□ -1.19
Col2a1P28481 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC7.64□□□□□ -1.19
Col2a1P28481 Gm45448-201ENSMUST00000211739 209 ntBASIC7.64□□□□□ -1.19
Col2a1P28481 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC7.64□□□□□ -1.19
Col2a1P28481 AC154861.1-201ENSMUST00000223767 800 ntBASIC7.64□□□□□ -1.19
Col2a1P28481 Dennd6a-204ENSMUST00000224248 2775 ntBASIC7.64□□□□□ -1.19
Col2a1P28481 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col2a1P28481 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col2a1P28481 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Col2a1P28481 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Col2a1P28481 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Col2a1P28481 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC7.64□□□□□ -1.19
Col2a1P28481 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Col2a1P28481 Sorbs2-201ENSMUST00000067065 6337 ntTSL 5 BASIC7.64□□□□□ -1.19
Col2a1P28481 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Col2a1P28481 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC7.64□□□□□ -1.19
Col2a1P28481 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Col2a1P28481 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Col2a1P28481 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC7.64□□□□□ -1.19
Col2a1P28481 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col2a1P28481 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC7.64□□□□□ -1.19
Col2a1P28481 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col2a1P28481 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col2a1P28481 AC155710.1-201ENSMUST00000219913 1353 ntBASIC7.64□□□□□ -1.19
Col2a1P28481 Gli3-201ENSMUST00000110510 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col2a1P28481 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col2a1P28481 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Col2a1P28481 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col2a1P28481 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC7.64□□□□□ -1.19
Col2a1P28481 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC7.64□□□□□ -1.19
Col2a1P28481 Gm37906-201ENSMUST00000192050 3035 ntBASIC7.64□□□□□ -1.19
Col2a1P28481 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Col2a1P28481 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
Col2a1P28481 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Col2a1P28481 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col2a1P28481 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Col2a1P28481 Gm3234-201ENSMUST00000222644 5061 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Col2a1P28481 Kcnj15-201ENSMUST00000037154 5089 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Col2a1P28481 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col2a1P28481 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Col2a1P28481 Gm22103-201ENSMUST00000116733 121 ntBASIC7.63□□□□□ -1.19
Col2a1P28481 Gm26475-201ENSMUST00000116769 121 ntBASIC7.63□□□□□ -1.19
Col2a1P28481 Gm23620-201ENSMUST00000116812 121 ntBASIC7.63□□□□□ -1.19
Col2a1P28481 Gm25042-201ENSMUST00000116856 121 ntBASIC7.63□□□□□ -1.19
Col2a1P28481 Gm25540-201ENSMUST00000116880 121 ntBASIC7.63□□□□□ -1.19
Col2a1P28481 Gm13578-201ENSMUST00000120849 590 ntBASIC7.63□□□□□ -1.19
Col2a1P28481 Gm12181-201ENSMUST00000121448 531 ntBASIC7.63□□□□□ -1.19
Col2a1P28481 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC7.63□□□□□ -1.19
Col2a1P28481 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC7.63□□□□□ -1.19
Col2a1P28481 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC7.63□□□□□ -1.19
Col2a1P28481 Mir5107-201ENSMUST00000175586 88 ntBASIC7.63□□□□□ -1.19
Col2a1P28481 Gm9529-201ENSMUST00000177598 579 ntBASIC7.63□□□□□ -1.19
Col2a1P28481 Gm23550-201ENSMUST00000179003 121 ntBASIC7.63□□□□□ -1.19
Col2a1P28481 Gm25123-201ENSMUST00000179154 121 ntBASIC7.63□□□□□ -1.19
Col2a1P28481 Gm25353-201ENSMUST00000179366 121 ntBASIC7.63□□□□□ -1.19
Col2a1P28481 n-R5s209-201ENSMUST00000179494 119 ntBASIC7.63□□□□□ -1.19
Col2a1P28481 Gm22992-201ENSMUST00000179496 121 ntBASIC7.63□□□□□ -1.19
Col2a1P28481 Gm25892-201ENSMUST00000179867 121 ntBASIC7.63□□□□□ -1.19
Col2a1P28481 Gm24092-201ENSMUST00000180257 121 ntBASIC7.63□□□□□ -1.19
Col2a1P28481 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC7.63□□□□□ -1.19
Col2a1P28481 Gm37548-201ENSMUST00000194519 3814 ntBASIC7.63□□□□□ -1.19
Col2a1P28481 Gm44265-201ENSMUST00000203631 465 ntBASIC7.63□□□□□ -1.19
Col2a1P28481 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Col2a1P28481 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col2a1P28481 Gm45485-201ENSMUST00000211229 357 ntBASIC7.63□□□□□ -1.19
Col2a1P28481 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Col2a1P28481 Gm22351-201ENSMUST00000083925 107 ntBASIC7.63□□□□□ -1.19
Col2a1P28481 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC7.63□□□□□ -1.19
Col2a1P28481 Gm43181-201ENSMUST00000197001 2072 ntBASIC7.63□□□□□ -1.19
Col2a1P28481 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Col2a1P28481 Gm44620-201ENSMUST00000209183 2887 ntBASIC7.63□□□□□ -1.19
Col2a1P28481 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC7.63□□□□□ -1.19
Col2a1P28481 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Col2a1P28481 Gm43176-201ENSMUST00000199653 2989 ntBASIC7.63□□□□□ -1.19
Col2a1P28481 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Col2a1P28481 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col2a1P28481 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Col2a1P28481 Gm16638-202ENSMUST00000208892 8508 ntTSL 5 BASIC7.63□□□□□ -1.19
Col2a1P28481 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Col2a1P28481 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Col2a1P28481 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC7.63□□□□□ -1.19
Col2a1P28481 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Col2a1P28481 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col2a1P28481 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Col2a1P28481 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Col2a1P28481 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC7.63□□□□□ -1.19
Col2a1P28481 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col2a1P28481 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC7.63□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms