Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Sdc1P18828 Gm5528-201ENSMUST00000076314 480 ntBASIC5.41□□□□□ -1.54
Sdc1P18828 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sdc1P18828 Dmrtc1c2-202ENSMUST00000087899 717 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
Sdc1P18828 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Sdc1P18828 AC158981.2-201ENSMUST00000227565 1537 ntBASIC5.41□□□□□ -1.54
Sdc1P18828 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sdc1P18828 Gm44193-201ENSMUST00000204822 2523 ntBASIC5.41□□□□□ -1.54
Sdc1P18828 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sdc1P18828 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Sdc1P18828 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sdc1P18828 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Sdc1P18828 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sdc1P18828 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Sdc1P18828 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC5.4□□□□□ -1.54
Sdc1P18828 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC5.4□□□□□ -1.54
Sdc1P18828 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Sdc1P18828 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Sdc1P18828 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC5.4□□□□□ -1.54
Sdc1P18828 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
Sdc1P18828 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Sdc1P18828 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC5.4□□□□□ -1.54
Sdc1P18828 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Sdc1P18828 Gm44901-201ENSMUST00000208157 3977 ntBASIC5.4□□□□□ -1.54
Sdc1P18828 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Sdc1P18828 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Sdc1P18828 Gm24938-201ENSMUST00000102225 110 ntBASIC5.4□□□□□ -1.54
Sdc1P18828 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Sdc1P18828 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC5.4□□□□□ -1.54
Sdc1P18828 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC5.4□□□□□ -1.54
Sdc1P18828 Gm7821-201ENSMUST00000117111 788 ntBASIC5.4□□□□□ -1.54
Sdc1P18828 Gm7785-201ENSMUST00000117121 892 ntBASIC5.4□□□□□ -1.54
Sdc1P18828 Gm15836-201ENSMUST00000119952 793 ntBASIC5.4□□□□□ -1.54
Sdc1P18828 M6pr-ps-201ENSMUST00000120481 830 ntBASIC5.4□□□□□ -1.54
Sdc1P18828 Gm9670-201ENSMUST00000121201 540 ntBASIC5.4□□□□□ -1.54
Sdc1P18828 Gm8577-201ENSMUST00000122420 986 ntBASIC5.4□□□□□ -1.54
Sdc1P18828 Gm12037-201ENSMUST00000123160 308 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Sdc1P18828 4930455G09Rik-201ENSMUST00000126231 630 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Sdc1P18828 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC5.4□□□□□ -1.54
Sdc1P18828 Wdr61-205ENSMUST00000130368 1162 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Sdc1P18828 Gm15857-201ENSMUST00000133476 789 ntTSL 3 BASIC5.4□□□□□ -1.54
Sdc1P18828 1700034H15Rik-205ENSMUST00000154116 926 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Sdc1P18828 Gm26408-201ENSMUST00000157672 127 ntBASIC5.4□□□□□ -1.54
Sdc1P18828 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC5.4□□□□□ -1.54
Sdc1P18828 Gm24465-201ENSMUST00000178398 107 ntBASIC5.4□□□□□ -1.54
Sdc1P18828 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Sdc1P18828 Gm27507-201ENSMUST00000184199 93 ntBASIC5.4□□□□□ -1.54
Sdc1P18828 4933400F21Rik-201ENSMUST00000186098 1007 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Sdc1P18828 Gm29561-201ENSMUST00000187838 631 ntTSL 3 BASIC5.4□□□□□ -1.54
Sdc1P18828 Gm9451-201ENSMUST00000188491 604 ntBASIC5.4□□□□□ -1.54
Sdc1P18828 Gm8860-201ENSMUST00000193160 445 ntBASIC5.4□□□□□ -1.54
Sdc1P18828 Gm37108-201ENSMUST00000194605 626 ntBASIC5.4□□□□□ -1.54
Sdc1P18828 Gm42734-201ENSMUST00000201656 878 ntBASIC5.4□□□□□ -1.54
Sdc1P18828 Gm7565-201ENSMUST00000203611 623 ntBASIC5.4□□□□□ -1.54
Sdc1P18828 4930557K07Rik-201ENSMUST00000205110 363 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Sdc1P18828 Gm6070-201ENSMUST00000207275 419 ntBASIC5.4□□□□□ -1.54
Sdc1P18828 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC5.4□□□□□ -1.54
Sdc1P18828 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC5.4□□□□□ -1.54
Sdc1P18828 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC5.4□□□□□ -1.54
Sdc1P18828 Gm9293-201ENSMUST00000223096 306 ntBASIC5.4□□□□□ -1.54
Sdc1P18828 AC158519.1-201ENSMUST00000228615 179 ntBASIC5.4□□□□□ -1.54
Sdc1P18828 Wdr61-201ENSMUST00000051822 1187 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Sdc1P18828 Gm5590-201ENSMUST00000059110 345 ntBASIC5.4□□□□□ -1.54
Sdc1P18828 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Sdc1P18828 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Sdc1P18828 n-R5s60-201ENSMUST00000083299 119 ntBASIC5.4□□□□□ -1.54
Sdc1P18828 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Sdc1P18828 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.55
Sdc1P18828 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Sdc1P18828 Gm42781-201ENSMUST00000201317 2719 ntBASIC5.4□□□□□ -1.55
Sdc1P18828 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC5.4□□□□□ -1.55
Sdc1P18828 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC5.4□□□□□ -1.55
Sdc1P18828 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC5.4□□□□□ -1.55
Sdc1P18828 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Sdc1P18828 Gm8836-201ENSMUST00000198196 1348 ntBASIC5.4□□□□□ -1.55
Sdc1P18828 Gm45657-201ENSMUST00000211318 1349 ntBASIC5.4□□□□□ -1.55
Sdc1P18828 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Sdc1P18828 Fam35a-206ENSMUST00000228626 3100 ntBASIC5.4□□□□□ -1.55
Sdc1P18828 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.55
Sdc1P18828 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Sdc1P18828 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Sdc1P18828 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC5.4□□□□□ -1.55
Sdc1P18828 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC5.4□□□□□ -1.55
Sdc1P18828 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.4□□□□□ -1.55
Sdc1P18828 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Sdc1P18828 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Sdc1P18828 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sdc1P18828 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC5.39□□□□□ -1.55
Sdc1P18828 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Sdc1P18828 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
Sdc1P18828 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sdc1P18828 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Sdc1P18828 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sdc1P18828 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Sdc1P18828 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC5.39□□□□□ -1.55
Sdc1P18828 Gm14606-201ENSMUST00000117078 1155 ntBASIC5.39□□□□□ -1.55
Sdc1P18828 Gm11207-201ENSMUST00000117824 414 ntBASIC5.39□□□□□ -1.55
Sdc1P18828 Gm12985-201ENSMUST00000118376 183 ntBASIC5.39□□□□□ -1.55
Sdc1P18828 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Sdc1P18828 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 115.4 ms