Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Lire1P11260 Gm43190-201ENSMUST00000187850 1779 ntBASIC6.74□□□□□ -1.33
Lire1P11260 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Lire1P11260 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Lire1P11260 Gm42577-201ENSMUST00000201367 3211 ntBASIC6.74□□□□□ -1.33
Lire1P11260 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Lire1P11260 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Lire1P11260 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC6.74□□□□□ -1.33
Lire1P11260 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Lire1P11260 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
Lire1P11260 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC6.73□□□□□ -1.33
Lire1P11260 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Lire1P11260 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Lire1P11260 Gm45457-201ENSMUST00000209931 3089 ntBASIC6.73□□□□□ -1.33
Lire1P11260 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Lire1P11260 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Lire1P11260 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Lire1P11260 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC6.73□□□□□ -1.33
Lire1P11260 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Lire1P11260 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Lire1P11260 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Lire1P11260 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Lire1P11260 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Lire1P11260 Gm21043-201ENSMUST00000199316 1517 ntBASIC6.73□□□□□ -1.33
Lire1P11260 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Lire1P11260 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Lire1P11260 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Lire1P11260 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Lire1P11260 Gm22231-201ENSMUST00000101027 73 ntBASIC6.73□□□□□ -1.33
Lire1P11260 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Lire1P11260 Gm23323-201ENSMUST00000104471 133 ntBASIC6.73□□□□□ -1.33
Lire1P11260 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Lire1P11260 Gm11462-201ENSMUST00000117749 562 ntBASIC6.73□□□□□ -1.33
Lire1P11260 Gm14248-201ENSMUST00000117790 544 ntBASIC6.73□□□□□ -1.33
Lire1P11260 Gm12331-201ENSMUST00000119927 622 ntBASIC6.73□□□□□ -1.33
Lire1P11260 Gm13877-201ENSMUST00000120614 417 ntBASIC6.73□□□□□ -1.33
Lire1P11260 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Lire1P11260 Gm13724-201ENSMUST00000122395 1155 ntBASIC6.73□□□□□ -1.33
Lire1P11260 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Lire1P11260 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Lire1P11260 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Lire1P11260 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Lire1P11260 Gm18848-201ENSMUST00000182069 792 ntBASIC6.73□□□□□ -1.33
Lire1P11260 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC6.73□□□□□ -1.33
Lire1P11260 Gm37883-201ENSMUST00000194970 725 ntBASIC6.73□□□□□ -1.33
Lire1P11260 Ighv8-15-201ENSMUST00000197770 294 ntBASIC6.73□□□□□ -1.33
Lire1P11260 Gm18765-201ENSMUST00000203166 660 ntBASIC6.73□□□□□ -1.33
Lire1P11260 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Lire1P11260 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Lire1P11260 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC6.73□□□□□ -1.33
Lire1P11260 Gm19073-201ENSMUST00000219978 555 ntBASIC6.73□□□□□ -1.33
Lire1P11260 Gm35638-201ENSMUST00000220724 652 ntBASIC6.73□□□□□ -1.33
Lire1P11260 Gm40853-201ENSMUST00000221342 582 ntBASIC6.73□□□□□ -1.33
Lire1P11260 Gm9255-201ENSMUST00000223225 581 ntBASIC6.73□□□□□ -1.33
Lire1P11260 AC140451.1-201ENSMUST00000227984 737 ntBASIC6.73□□□□□ -1.33
Lire1P11260 AC131033.1-201ENSMUST00000228223 279 ntBASIC6.73□□□□□ -1.33
Lire1P11260 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Lire1P11260 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Lire1P11260 Gm10108-201ENSMUST00000078246 319 ntBASIC6.73□□□□□ -1.33
Lire1P11260 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC6.73□□□□□ -1.33
Lire1P11260 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Lire1P11260 AC129085.2-201ENSMUST00000223763 2800 ntBASIC6.73□□□□□ -1.33
Lire1P11260 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Lire1P11260 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC6.73□□□□□ -1.33
Lire1P11260 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Lire1P11260 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC6.73□□□□□ -1.33
Lire1P11260 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC6.73□□□□□ -1.33
Lire1P11260 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC6.73□□□□□ -1.33
Lire1P11260 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC6.73□□□□□ -1.33
Lire1P11260 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Lire1P11260 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC6.73□□□□□ -1.33
Lire1P11260 Gm43627-201ENSMUST00000197119 2299 ntBASIC6.73□□□□□ -1.33
Lire1P11260 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
Lire1P11260 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Lire1P11260 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Lire1P11260 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Lire1P11260 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Lire1P11260 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Lire1P11260 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Lire1P11260 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Lire1P11260 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Lire1P11260 Gm10855-201ENSMUST00000100426 2541 ntBASIC6.72□□□□□ -1.33
Lire1P11260 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Lire1P11260 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Lire1P11260 n-R5s172-201ENSMUST00000104508 114 ntBASIC6.72□□□□□ -1.33
Lire1P11260 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Lire1P11260 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Lire1P11260 Gm14864-201ENSMUST00000116164 1087 ntBASIC6.72□□□□□ -1.33
Lire1P11260 Gm13444-201ENSMUST00000119445 522 ntBASIC6.72□□□□□ -1.33
Lire1P11260 Gm7599-201ENSMUST00000121453 796 ntBASIC6.72□□□□□ -1.33
Lire1P11260 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC6.72□□□□□ -1.33
Lire1P11260 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC6.72□□□□□ -1.33
Lire1P11260 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Lire1P11260 Gm36994-201ENSMUST00000192941 492 ntBASIC6.72□□□□□ -1.33
Lire1P11260 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC6.72□□□□□ -1.33
Lire1P11260 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC6.72□□□□□ -1.33
Lire1P11260 Gm21054-201ENSMUST00000203981 380 ntBASIC6.72□□□□□ -1.33
Lire1P11260 Gm44422-201ENSMUST00000204142 1025 ntBASIC6.72□□□□□ -1.33
Lire1P11260 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC6.72□□□□□ -1.33
Lire1P11260 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC6.72□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms