Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Gm37043-201ENSMUST00000194609 3105 ntBASIC10.66□□□□□ -0.7
NclP09405 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NclP09405 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
NclP09405 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
NclP09405 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
NclP09405 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.7
NclP09405 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NclP09405 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC10.65□□□□□ -0.7
NclP09405 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NclP09405 Gm10307-201ENSMUST00000189839 1337 ntBASIC10.65□□□□□ -0.7
NclP09405 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
NclP09405 Gm22781-201ENSMUST00000104083 137 ntBASIC10.65□□□□□ -0.7
NclP09405 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
NclP09405 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC10.65□□□□□ -0.7
NclP09405 Gm2288-201ENSMUST00000118560 638 ntBASIC10.65□□□□□ -0.7
NclP09405 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
NclP09405 Gm14531-201ENSMUST00000120845 285 ntBASIC10.65□□□□□ -0.7
NclP09405 Gm14253-201ENSMUST00000122112 639 ntBASIC10.65□□□□□ -0.7
NclP09405 Pla2g2a-203ENSMUST00000135748 788 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
NclP09405 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
NclP09405 Gm26183-201ENSMUST00000157685 139 ntBASIC10.65□□□□□ -0.7
NclP09405 Gm26323-201ENSMUST00000157743 175 ntBASIC10.65□□□□□ -0.7
NclP09405 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
NclP09405 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
NclP09405 Gm26729-201ENSMUST00000180744 352 ntBASIC10.65□□□□□ -0.7
NclP09405 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC10.65□□□□□ -0.7
NclP09405 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC10.65□□□□□ -0.7
NclP09405 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC10.65□□□□□ -0.7
NclP09405 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC10.65□□□□□ -0.7
NclP09405 Gm18469-201ENSMUST00000208850 439 ntBASIC10.65□□□□□ -0.7
NclP09405 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC10.65□□□□□ -0.7
NclP09405 Gm18255-201ENSMUST00000211316 765 ntBASIC10.65□□□□□ -0.7
NclP09405 Gm45887-201ENSMUST00000212672 2998 ntBASIC10.65□□□□□ -0.7
NclP09405 Gm34424-201ENSMUST00000213400 782 ntBASIC10.65□□□□□ -0.7
NclP09405 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC10.65□□□□□ -0.7
NclP09405 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC10.65□□□□□ -0.7
NclP09405 AC161275.1-201ENSMUST00000224668 208 ntBASIC10.65□□□□□ -0.7
NclP09405 AC134864.1-201ENSMUST00000226326 511 ntBASIC10.65□□□□□ -0.7
NclP09405 AC158981.3-201ENSMUST00000226844 1024 ntBASIC10.65□□□□□ -0.7
NclP09405 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NclP09405 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
NclP09405 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
NclP09405 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC10.65□□□□□ -0.7
NclP09405 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NclP09405 Gm43099-201ENSMUST00000198943 5241 ntBASIC10.65□□□□□ -0.7
NclP09405 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
NclP09405 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
NclP09405 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NclP09405 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NclP09405 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
NclP09405 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC10.65□□□□□ -0.71
NclP09405 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
NclP09405 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
NclP09405 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
NclP09405 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
NclP09405 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NclP09405 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
NclP09405 Gm26575-201ENSMUST00000181714 2232 ntBASIC10.64□□□□□ -0.71
NclP09405 Gm6300-201ENSMUST00000192393 1498 ntBASIC10.64□□□□□ -0.71
NclP09405 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
NclP09405 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
NclP09405 Gm13352-201ENSMUST00000117515 262 ntBASIC10.64□□□□□ -0.71
NclP09405 Gm8662-201ENSMUST00000118644 574 ntBASIC10.64□□□□□ -0.71
NclP09405 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC10.64□□□□□ -0.71
NclP09405 Gm9208-201ENSMUST00000120468 948 ntBASIC10.64□□□□□ -0.71
NclP09405 Gm12140-201ENSMUST00000121214 544 ntBASIC10.64□□□□□ -0.71
NclP09405 Gm23819-201ENSMUST00000158744 109 ntBASIC10.64□□□□□ -0.71
NclP09405 Il21-202ENSMUST00000161015 529 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
NclP09405 Gm17212-201ENSMUST00000166666 259 ntBASIC10.64□□□□□ -0.71
NclP09405 Gm17075-201ENSMUST00000171924 670 ntBASIC10.64□□□□□ -0.71
NclP09405 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
NclP09405 Gm29492-201ENSMUST00000187124 457 ntBASIC10.64□□□□□ -0.71
NclP09405 Gm37526-201ENSMUST00000194640 619 ntBASIC10.64□□□□□ -0.71
NclP09405 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC10.64□□□□□ -0.71
NclP09405 Gm43656-201ENSMUST00000197882 434 ntBASIC10.64□□□□□ -0.71
NclP09405 Gm3549-201ENSMUST00000203873 794 ntBASIC10.64□□□□□ -0.71
NclP09405 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC10.64□□□□□ -0.71
NclP09405 AC159188.3-201ENSMUST00000224199 880 ntBASIC10.64□□□□□ -0.71
NclP09405 AC154184.2-201ENSMUST00000225335 349 ntBASIC10.64□□□□□ -0.71
NclP09405 AC154380.1-201ENSMUST00000226804 720 ntBASIC10.64□□□□□ -0.71
NclP09405 AC122459.3-201ENSMUST00000228508 1042 ntBASIC10.64□□□□□ -0.71
NclP09405 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
NclP09405 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
NclP09405 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
NclP09405 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
NclP09405 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NclP09405 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC10.64□□□□□ -0.71
NclP09405 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
NclP09405 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC10.64□□□□□ -0.71
NclP09405 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NclP09405 Gm37161-201ENSMUST00000191994 2697 ntBASIC10.64□□□□□ -0.71
NclP09405 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NclP09405 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NclP09405 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
NclP09405 Gm37984-201ENSMUST00000191641 3733 ntBASIC10.63□□□□□ -0.71
NclP09405 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
NclP09405 Gm37078-201ENSMUST00000193314 2009 ntBASIC10.63□□□□□ -0.71
NclP09405 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
NclP09405 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
NclP09405 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms