Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Fam228a-204ENSMUST00000222363 2284 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxd3P09027 Gja1-201ENSMUST00000068581 3071 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxd3P09027 Mat1a-203ENSMUST00000225720 3468 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Hoxd3P09027 Pde7b-201ENSMUST00000020165 4137 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxd3P09027 Slc31a1-201ENSMUST00000084526 3718 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxd3P09027 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Hoxd3P09027 Vmn2r8-201ENSMUST00000172140 2547 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Hoxd3P09027 Gm42648-201ENSMUST00000200774 2505 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 Olfr704-201ENSMUST00000080925 2124 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Hoxd3P09027 Gm43890-201ENSMUST00000203437 2799 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
Hoxd3P09027 Entpd5-205ENSMUST00000120942 4881 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxd3P09027 AC154461.2-201ENSMUST00000225462 1980 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 Wdfy3-205ENSMUST00000174598 10581 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Hoxd3P09027 Golga3-201ENSMUST00000031477 4805 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Hoxd3P09027 Gm37821-201ENSMUST00000195476 1843 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxd3P09027 Gm30382-202ENSMUST00000199007 1801 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxd3P09027 1700001L19Rik-201ENSMUST00000022007 1826 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxd3P09027 Card6-201ENSMUST00000118365 5995 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Hoxd3P09027 4930443O20Rik-201ENSMUST00000135659 1443 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxd3P09027 Arpp21-221ENSMUST00000162065 2996 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxd3P09027 Ephx1-202ENSMUST00000111068 1699 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxd3P09027 Gm43161-201ENSMUST00000197020 1688 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 Sf3b1-201ENSMUST00000027127 6195 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxd3P09027 Eif2ak4-204ENSMUST00000110870 5116 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxd3P09027 Stag3-201ENSMUST00000048028 4211 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxd3P09027 Olfr140-203ENSMUST00000216475 3574 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Hoxd3P09027 Efcab9-202ENSMUST00000109377 615 ntAPPRIS ALT2 TSL 3 BASIC6.53□□□□□ -1.36
Hoxd3P09027 Gm11105-201ENSMUST00000112781 478 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Hoxd3P09027 Gm14365-201ENSMUST00000117535 587 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 Gm13160-201ENSMUST00000118441 627 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 Gm14769-201ENSMUST00000118590 432 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 Gm13627-201ENSMUST00000119700 706 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 Gm14986-201ENSMUST00000121262 1002 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 Gm12358-201ENSMUST00000121842 520 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 Gm11203-201ENSMUST00000122169 741 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 Gm26480-201ENSMUST00000122619 297 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 Rpl37rt-202ENSMUST00000124641 294 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC6.53□□□□□ -1.36
Hoxd3P09027 Tle6-213ENSMUST00000151858 627 ntTSL 3 BASIC6.53□□□□□ -1.36
Hoxd3P09027 Gm24063-201ENSMUST00000157491 105 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 Gm23542-201ENSMUST00000158208 96 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 Gm24838-201ENSMUST00000158684 130 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 Gm21772-201ENSMUST00000169213 478 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 Gm17126-201ENSMUST00000172276 523 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC6.53□□□□□ -1.36
Hoxd3P09027 Mir5623-201ENSMUST00000176631 70 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 Six3os1-213ENSMUST00000177487 537 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxd3P09027 Fendrr-201ENSMUST00000181231 1092 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxd3P09027 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxd3P09027 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC6.53□□□□□ -1.36
Hoxd3P09027 Gm37260-201ENSMUST00000193748 1251 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC6.53□□□□□ -1.36
Hoxd3P09027 Gm37450-201ENSMUST00000195218 170 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 Pisrt1-201ENSMUST00000195532 515 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC6.53□□□□□ -1.36
Hoxd3P09027 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 Gm29920-201ENSMUST00000206876 754 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 Gm16475-202ENSMUST00000209033 528 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxd3P09027 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC6.53□□□□□ -1.36
Hoxd3P09027 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Hoxd3P09027 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC6.53□□□□□ -1.36
Hoxd3P09027 CT030709.1-201ENSMUST00000214443 443 ntTSL 5 BASIC6.53□□□□□ -1.36
Hoxd3P09027 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 AC131745.3-201ENSMUST00000223582 554 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 AC132112.1-201ENSMUST00000226354 505 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 AC158954.1-201ENSMUST00000228272 1006 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 Olfr419-201ENSMUST00000061990 1088 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Hoxd3P09027 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Hoxd3P09027 Olfr1333-201ENSMUST00000076019 954 ntAPPRIS P2 BASIC6.53□□□□□ -1.36
Hoxd3P09027 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Hoxd3P09027 Gm23628-201ENSMUST00000082464 173 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 Gm5560-201ENSMUST00000086918 892 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Hoxd3P09027 Flii-201ENSMUST00000002889 4060 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxd3P09027 Rasgrp1-205ENSMUST00000173541 2283 ntTSL 5 BASIC6.53□□□□□ -1.36
Hoxd3P09027 AC153955.4-201ENSMUST00000217069 2752 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 Rad54l-201ENSMUST00000102704 3025 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxd3P09027 Map4k4-213ENSMUST00000193682 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxd3P09027 Grk3-201ENSMUST00000065167 6533 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxd3P09027 Gm19031-201ENSMUST00000176280 1365 ntBASIC6.53□□□□□ -1.36
Hoxd3P09027 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxd3P09027 9530052C20Rik-201ENSMUST00000181882 1372 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxd3P09027 Zfp408-202ENSMUST00000111333 3740 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxd3P09027 Foxp3-203ENSMUST00000115739 3739 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxd3P09027 Rnf222-201ENSMUST00000065213 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxd3P09027 Fmr1os-201ENSMUST00000181533 2743 ntTSL 2 BASIC6.53□□□□□ -1.36
Hoxd3P09027 Mill1-201ENSMUST00000066780 2489 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxd3P09027 Zfp82-203ENSMUST00000182546 1964 ntAPPRIS ALT2 TSL 3 BASIC6.53□□□□□ -1.36
Hoxd3P09027 Gm3839-201ENSMUST00000181173 1712 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Hoxd3P09027 Ttc21a-201ENSMUST00000035100 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxd3P09027 Naip1-204ENSMUST00000222155 5361 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxd3P09027 Gria2-202ENSMUST00000107745 4026 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
Hoxd3P09027 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Hoxd3P09027 Cast-201ENSMUST00000065629 2910 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxd3P09027 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms