Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Dennd6a-204ENSMUST00000224248 2775 ntBASIC8.13□□□□□ -1.11
Col4a1P02463 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Col4a1P02463 Olfr376-202ENSMUST00000120401 3342 ntAPPRIS P3 TSL 2 BASIC8.13□□□□□ -1.11
Col4a1P02463 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Col4a1P02463 Gm28583-201ENSMUST00000188903 2141 ntBASIC8.12□□□□□ -1.11
Col4a1P02463 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC8.12□□□□□ -1.11
Col4a1P02463 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Col4a1P02463 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Col4a1P02463 AC022775.1-201ENSMUST00000228163 2698 ntBASIC8.12□□□□□ -1.11
Col4a1P02463 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col4a1P02463 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Col4a1P02463 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Col4a1P02463 Gm22103-201ENSMUST00000116733 121 ntBASIC8.12□□□□□ -1.11
Col4a1P02463 Gm26475-201ENSMUST00000116769 121 ntBASIC8.12□□□□□ -1.11
Col4a1P02463 Gm23620-201ENSMUST00000116812 121 ntBASIC8.12□□□□□ -1.11
Col4a1P02463 Gm25042-201ENSMUST00000116856 121 ntBASIC8.12□□□□□ -1.11
Col4a1P02463 Gm25540-201ENSMUST00000116880 121 ntBASIC8.12□□□□□ -1.11
Col4a1P02463 Gm12442-201ENSMUST00000118372 338 ntBASIC8.12□□□□□ -1.11
Col4a1P02463 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC8.12□□□□□ -1.11
Col4a1P02463 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Col4a1P02463 Gm23550-201ENSMUST00000179003 121 ntBASIC8.12□□□□□ -1.11
Col4a1P02463 Gm25123-201ENSMUST00000179154 121 ntBASIC8.12□□□□□ -1.11
Col4a1P02463 Gm25353-201ENSMUST00000179366 121 ntBASIC8.12□□□□□ -1.11
Col4a1P02463 Gm22992-201ENSMUST00000179496 121 ntBASIC8.12□□□□□ -1.11
Col4a1P02463 Gm25892-201ENSMUST00000179867 121 ntBASIC8.12□□□□□ -1.11
Col4a1P02463 Gm24092-201ENSMUST00000180257 121 ntBASIC8.12□□□□□ -1.11
Col4a1P02463 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC8.12□□□□□ -1.11
Col4a1P02463 Gm44239-201ENSMUST00000204228 271 ntBASIC8.12□□□□□ -1.11
Col4a1P02463 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC8.12□□□□□ -1.11
Col4a1P02463 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Col4a1P02463 Gm19182-201ENSMUST00000207139 577 ntBASIC8.12□□□□□ -1.11
Col4a1P02463 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC8.12□□□□□ -1.11
Col4a1P02463 Gm46364-201ENSMUST00000218548 319 ntBASIC8.12□□□□□ -1.11
Col4a1P02463 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC8.12□□□□□ -1.11
Col4a1P02463 AV026068-216ENSMUST00000223874 328 ntBASIC8.12□□□□□ -1.11
Col4a1P02463 AV026068-218ENSMUST00000223980 575 ntBASIC8.12□□□□□ -1.11
Col4a1P02463 CT025598.1-201ENSMUST00000225140 427 ntBASIC8.12□□□□□ -1.11
Col4a1P02463 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Col4a1P02463 Pax6-208ENSMUST00000111088 4427 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Col4a1P02463 Ddx6-201ENSMUST00000170489 6065 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Col4a1P02463 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Col4a1P02463 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col4a1P02463 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Col4a1P02463 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Col4a1P02463 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC8.12□□□□□ -1.11
Col4a1P02463 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col4a1P02463 Gm37084-201ENSMUST00000191688 5898 ntBASIC8.12□□□□□ -1.11
Col4a1P02463 Mettl21e-201ENSMUST00000054801 3211 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col4a1P02463 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Col4a1P02463 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC8.12□□□□□ -1.11
Col4a1P02463 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC8.12□□□□□ -1.11
Col4a1P02463 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Col4a1P02463 Casr-203ENSMUST00000172826 3659 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Col4a1P02463 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a1P02463 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Col4a1P02463 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Col4a1P02463 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC8.11□□□□□ -1.11
Col4a1P02463 Gm13626-201ENSMUST00000119435 402 ntBASIC8.11□□□□□ -1.11
Col4a1P02463 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC8.11□□□□□ -1.11
Col4a1P02463 Gm9597-201ENSMUST00000171913 602 ntBASIC8.11□□□□□ -1.11
Col4a1P02463 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Col4a1P02463 Gm25244-201ENSMUST00000178089 132 ntBASIC8.11□□□□□ -1.11
Col4a1P02463 Mir6361-201ENSMUST00000185079 101 ntBASIC8.11□□□□□ -1.11
Col4a1P02463 Gm29357-201ENSMUST00000186877 698 ntBASIC8.11□□□□□ -1.11
Col4a1P02463 Gm37430-201ENSMUST00000193039 196 ntBASIC8.11□□□□□ -1.11
Col4a1P02463 Gm43098-201ENSMUST00000199989 1297 ntBASIC8.11□□□□□ -1.11
Col4a1P02463 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC8.11□□□□□ -1.11
Col4a1P02463 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC8.11□□□□□ -1.11
Col4a1P02463 Olfr467-201ENSMUST00000084756 927 ntBASIC8.11□□□□□ -1.11
Col4a1P02463 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a1P02463 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a1P02463 Flna-203ENSMUST00000114299 8456 ntAPPRIS P2 TSL 5 BASIC8.11□□□□□ -1.11
Col4a1P02463 Fam198b-201ENSMUST00000029567 6627 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a1P02463 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a1P02463 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a1P02463 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a1P02463 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a1P02463 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a1P02463 AC159195.2-201ENSMUST00000223670 3757 ntBASIC8.11□□□□□ -1.11
Col4a1P02463 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a1P02463 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a1P02463 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC8.11□□□□□ -1.11
Col4a1P02463 Zfp142-202ENSMUST00000066986 5756 ntTSL 5 BASIC8.11□□□□□ -1.11
Col4a1P02463 C87436-203ENSMUST00000113700 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a1P02463 Gm2223-201ENSMUST00000112099 1350 ntBASIC8.11□□□□□ -1.11
Col4a1P02463 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a1P02463 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Col4a1P02463 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Col4a1P02463 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a1P02463 Prdm15-203ENSMUST00000121584 6194 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a1P02463 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC8.11□□□□□ -1.11
Col4a1P02463 Ctnnd1-212ENSMUST00000111686 6061 ntTSL 5 BASIC8.11□□□□□ -1.11
Col4a1P02463 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a1P02463 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC8.11□□□□□ -1.11
Col4a1P02463 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Col4a1P02463 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a1P02463 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Col4a1P02463 Gm15332-201ENSMUST00000118386 357 ntBASIC8.11□□□□□ -1.11
Col4a1P02463 Gm13772-201ENSMUST00000118431 317 ntBASIC8.11□□□□□ -1.11
Col4a1P02463 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms