Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Pknox1-201ENSMUST00000097352 4172 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc180J3QNE4 Hist1h1d-201ENSMUST00000045301 7425 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ccdc180J3QNE4 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc180J3QNE4 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc180J3QNE4 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc180J3QNE4 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccdc180J3QNE4 Dlgap2-201ENSMUST00000043279 3580 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc180J3QNE4 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc180J3QNE4 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc180J3QNE4 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC12.32□□□□□ -0.44
Ccdc180J3QNE4 Gm14745-201ENSMUST00000118480 1096 ntBASIC12.32□□□□□ -0.44
Ccdc180J3QNE4 Gm14054-201ENSMUST00000120744 704 ntBASIC12.32□□□□□ -0.44
Ccdc180J3QNE4 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc180J3QNE4 Gm28413-201ENSMUST00000189369 291 ntBASIC12.32□□□□□ -0.44
Ccdc180J3QNE4 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc180J3QNE4 Gm34768-201ENSMUST00000193884 565 ntBASIC12.32□□□□□ -0.44
Ccdc180J3QNE4 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC12.32□□□□□ -0.44
Ccdc180J3QNE4 AC120375.2-202ENSMUST00000228722 397 ntBASIC12.32□□□□□ -0.44
Ccdc180J3QNE4 Gm24695-201ENSMUST00000083877 83 ntBASIC12.32□□□□□ -0.44
Ccdc180J3QNE4 Ctnnd1-219ENSMUST00000111693 6255 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc180J3QNE4 Gm44745-201ENSMUST00000206563 2723 ntBASIC12.32□□□□□ -0.44
Ccdc180J3QNE4 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc180J3QNE4 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc180J3QNE4 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc180J3QNE4 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc180J3QNE4 Ctnnd1-210ENSMUST00000111684 6021 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc180J3QNE4 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Ccdc180J3QNE4 Gm42577-201ENSMUST00000201367 3211 ntBASIC12.32□□□□□ -0.44
Ccdc180J3QNE4 Pogz-204ENSMUST00000107269 5966 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc180J3QNE4 Mettl16-205ENSMUST00000141755 12584 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc180J3QNE4 Ctnnd1-213ENSMUST00000111687 6030 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc180J3QNE4 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc180J3QNE4 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ccdc180J3QNE4 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC12.32□□□□□ -0.44
Ccdc180J3QNE4 Gm27512-201ENSMUST00000175328 126 ntBASIC12.32□□□□□ -0.44
Ccdc180J3QNE4 Gm7952-201ENSMUST00000180540 984 ntBASIC12.32□□□□□ -0.44
Ccdc180J3QNE4 Mir7211-201ENSMUST00000184071 63 ntBASIC12.32□□□□□ -0.44
Ccdc180J3QNE4 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc180J3QNE4 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc180J3QNE4 Gm37880-201ENSMUST00000192216 3257 ntBASIC12.32□□□□□ -0.44
Ccdc180J3QNE4 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc180J3QNE4 Zcchc6-201ENSMUST00000071703 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc180J3QNE4 Ppp2r3c-201ENSMUST00000021410 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc180J3QNE4 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc180J3QNE4 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc180J3QNE4 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc180J3QNE4 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc180J3QNE4 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc180J3QNE4 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc180J3QNE4 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc180J3QNE4 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc180J3QNE4 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc180J3QNE4 Gm13835-201ENSMUST00000118459 685 ntBASIC12.31□□□□□ -0.44
Ccdc180J3QNE4 Gm19840-201ENSMUST00000169624 882 ntBASIC12.31□□□□□ -0.44
Ccdc180J3QNE4 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc180J3QNE4 Gm37548-201ENSMUST00000194519 3814 ntBASIC12.31□□□□□ -0.44
Ccdc180J3QNE4 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC12.31□□□□□ -0.44
Ccdc180J3QNE4 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc180J3QNE4 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC12.31□□□□□ -0.44
Ccdc180J3QNE4 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc180J3QNE4 Gm25515-201ENSMUST00000083858 157 ntBASIC12.31□□□□□ -0.44
Ccdc180J3QNE4 Fam160a2-208ENSMUST00000179474 10853 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc180J3QNE4 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc180J3QNE4 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc180J3QNE4 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc180J3QNE4 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc180J3QNE4 Exd1-203ENSMUST00000171024 5290 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc180J3QNE4 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC12.31□□□□□ -0.44
Ccdc180J3QNE4 AC154461.6-201ENSMUST00000224815 2630 ntBASIC12.3□□□□□ -0.44
Ccdc180J3QNE4 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc180J3QNE4 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc180J3QNE4 Prdm16-206ENSMUST00000105638 8601 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc180J3QNE4 Fto-204ENSMUST00000136802 3751 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc180J3QNE4 Gpatch8-206ENSMUST00000143842 6871 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc180J3QNE4 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC12.3□□□□□ -0.44
Ccdc180J3QNE4 Gm25782-201ENSMUST00000122526 289 ntBASIC12.3□□□□□ -0.44
Ccdc180J3QNE4 Gm23259-201ENSMUST00000158318 303 ntBASIC12.3□□□□□ -0.44
Ccdc180J3QNE4 Cfhr3-201ENSMUST00000170441 1022 ntBASIC12.3□□□□□ -0.44
Ccdc180J3QNE4 Gm22548-201ENSMUST00000174899 78 ntBASIC12.3□□□□□ -0.44
Ccdc180J3QNE4 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc180J3QNE4 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC12.3□□□□□ -0.44
Ccdc180J3QNE4 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC12.3□□□□□ -0.44
Ccdc180J3QNE4 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ccdc180J3QNE4 AC154634.2-201ENSMUST00000225983 1184 ntBASIC12.3□□□□□ -0.44
Ccdc180J3QNE4 AC139197.1-201ENSMUST00000228332 813 ntBASIC12.3□□□□□ -0.44
Ccdc180J3QNE4 Gm10221-201ENSMUST00000088299 309 ntBASIC12.3□□□□□ -0.44
Ccdc180J3QNE4 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC12.3□□□□□ -0.44
Ccdc180J3QNE4 AC122356.1-202ENSMUST00000227328 2758 ntBASIC12.3□□□□□ -0.44
Ccdc180J3QNE4 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc180J3QNE4 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc180J3QNE4 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc180J3QNE4 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc180J3QNE4 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc180J3QNE4 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc180J3QNE4 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Ccdc180J3QNE4 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc180J3QNE4 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc180J3QNE4 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC12.29□□□□□ -0.44
Ccdc180J3QNE4 Gm8524-201ENSMUST00000186232 379 ntBASIC12.29□□□□□ -0.44
Ccdc180J3QNE4 Gm28428-201ENSMUST00000188886 697 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms