Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Rad51b-203ENSMUST00000218039 2187 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
NpcdF8VQB8 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC8.77□□□□□ -1.01
NpcdF8VQB8 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
NpcdF8VQB8 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
NpcdF8VQB8 Gm43537-201ENSMUST00000199064 3110 ntBASIC8.77□□□□□ -1.01
NpcdF8VQB8 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
NpcdF8VQB8 Gm37496-201ENSMUST00000191930 2509 ntBASIC8.77□□□□□ -1.01
NpcdF8VQB8 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
NpcdF8VQB8 Gm43430-201ENSMUST00000196513 3897 ntBASIC8.77□□□□□ -1.01
NpcdF8VQB8 Gm31408-201ENSMUST00000216695 1455 ntTSL 5 BASIC8.77□□□□□ -1.01
NpcdF8VQB8 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
NpcdF8VQB8 Gm43612-201ENSMUST00000196087 3207 ntBASIC8.76□□□□□ -1.01
NpcdF8VQB8 Tmem161b-206ENSMUST00000225069 2414 ntBASIC8.76□□□□□ -1.01
NpcdF8VQB8 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC8.76□□□□□ -1.01
NpcdF8VQB8 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
NpcdF8VQB8 Gm2108-201ENSMUST00000165058 2177 ntBASIC8.76□□□□□ -1.01
NpcdF8VQB8 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
NpcdF8VQB8 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
NpcdF8VQB8 AC158686.1-201ENSMUST00000218068 2332 ntBASIC8.76□□□□□ -1.01
NpcdF8VQB8 Gm19031-201ENSMUST00000176280 1365 ntBASIC8.76□□□□□ -1.01
NpcdF8VQB8 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
NpcdF8VQB8 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
NpcdF8VQB8 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
NpcdF8VQB8 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
NpcdF8VQB8 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
NpcdF8VQB8 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
NpcdF8VQB8 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
NpcdF8VQB8 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
NpcdF8VQB8 Olfr1254-202ENSMUST00000111523 2650 ntAPPRIS P1 TSL 3 BASIC8.76□□□□□ -1.01
NpcdF8VQB8 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
NpcdF8VQB8 Gm4673-201ENSMUST00000181395 3660 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
NpcdF8VQB8 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
NpcdF8VQB8 Gm22256-201ENSMUST00000102291 107 ntBASIC8.76□□□□□ -1.01
NpcdF8VQB8 Gm24340-201ENSMUST00000104208 97 ntBASIC8.76□□□□□ -1.01
NpcdF8VQB8 Gm12383-201ENSMUST00000120628 760 ntBASIC8.76□□□□□ -1.01
NpcdF8VQB8 Gm4886-201ENSMUST00000121874 1176 ntBASIC8.76□□□□□ -1.01
NpcdF8VQB8 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
NpcdF8VQB8 Gm25271-201ENSMUST00000157273 290 ntBASIC8.76□□□□□ -1.01
NpcdF8VQB8 Gm23386-201ENSMUST00000158585 144 ntBASIC8.76□□□□□ -1.01
NpcdF8VQB8 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC8.76□□□□□ -1.01
NpcdF8VQB8 Gm15795-201ENSMUST00000160969 553 ntBASIC8.76□□□□□ -1.01
NpcdF8VQB8 Gm5871-201ENSMUST00000176461 718 ntBASIC8.76□□□□□ -1.01
NpcdF8VQB8 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC8.76□□□□□ -1.01
NpcdF8VQB8 Gm38122-201ENSMUST00000192679 885 ntBASIC8.76□□□□□ -1.01
NpcdF8VQB8 Gm38333-201ENSMUST00000193608 604 ntBASIC8.76□□□□□ -1.01
NpcdF8VQB8 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC8.76□□□□□ -1.01
NpcdF8VQB8 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC8.76□□□□□ -1.01
NpcdF8VQB8 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
NpcdF8VQB8 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
NpcdF8VQB8 Gm10126-201ENSMUST00000221732 168 ntBASIC8.76□□□□□ -1.01
NpcdF8VQB8 AC153152.2-201ENSMUST00000223165 959 ntBASIC8.76□□□□□ -1.01
NpcdF8VQB8 CT009713.5-201ENSMUST00000224508 909 ntBASIC8.76□□□□□ -1.01
NpcdF8VQB8 AC164294.1-201ENSMUST00000224682 688 ntBASIC8.76□□□□□ -1.01
NpcdF8VQB8 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
NpcdF8VQB8 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
NpcdF8VQB8 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
NpcdF8VQB8 Olfr401-201ENSMUST00000079827 948 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
NpcdF8VQB8 Gm23448-201ENSMUST00000083151 104 ntBASIC8.76□□□□□ -1.01
NpcdF8VQB8 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
NpcdF8VQB8 Gm37370-201ENSMUST00000191996 1410 ntBASIC8.76□□□□□ -1.01
NpcdF8VQB8 Musk-203ENSMUST00000098057 3422 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
NpcdF8VQB8 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
NpcdF8VQB8 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
NpcdF8VQB8 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC8.76□□□□□ -1.01
NpcdF8VQB8 AC187103.1-201ENSMUST00000224641 1475 ntBASIC8.76□□□□□ -1.01
NpcdF8VQB8 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC8.76□□□□□ -1.01
NpcdF8VQB8 AC168056.4-201ENSMUST00000223835 2567 ntBASIC8.75□□□□□ -1.01
NpcdF8VQB8 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
NpcdF8VQB8 Gm44624-201ENSMUST00000208700 2278 ntBASIC8.75□□□□□ -1.01
NpcdF8VQB8 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
NpcdF8VQB8 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC8.75□□□□□ -1.01
NpcdF8VQB8 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
NpcdF8VQB8 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC8.75□□□□□ -1.01
NpcdF8VQB8 4930546K05Rik-202ENSMUST00000216586 3539 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
NpcdF8VQB8 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
NpcdF8VQB8 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
NpcdF8VQB8 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
NpcdF8VQB8 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC8.75□□□□□ -1.01
NpcdF8VQB8 Gm37151-201ENSMUST00000194631 5007 ntBASIC8.75□□□□□ -1.01
NpcdF8VQB8 Gm43526-201ENSMUST00000196666 1565 ntBASIC8.75□□□□□ -1.01
NpcdF8VQB8 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
NpcdF8VQB8 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
NpcdF8VQB8 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
NpcdF8VQB8 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
NpcdF8VQB8 Gm12468-201ENSMUST00000116189 404 ntBASIC8.75□□□□□ -1.01
NpcdF8VQB8 Gm26169-201ENSMUST00000158420 135 ntBASIC8.75□□□□□ -1.01
NpcdF8VQB8 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
NpcdF8VQB8 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
NpcdF8VQB8 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC8.75□□□□□ -1.01
NpcdF8VQB8 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC8.75□□□□□ -1.01
NpcdF8VQB8 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC8.75□□□□□ -1.01
NpcdF8VQB8 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC8.75□□□□□ -1.01
NpcdF8VQB8 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC8.75□□□□□ -1.01
NpcdF8VQB8 Gm36974-201ENSMUST00000194200 1071 ntBASIC8.75□□□□□ -1.01
NpcdF8VQB8 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC8.75□□□□□ -1.01
NpcdF8VQB8 Gm2860-201ENSMUST00000199226 707 ntBASIC8.75□□□□□ -1.01
NpcdF8VQB8 Gm7166-201ENSMUST00000199715 303 ntBASIC8.75□□□□□ -1.01
NpcdF8VQB8 Gm43967-201ENSMUST00000203787 301 ntBASIC8.75□□□□□ -1.01
NpcdF8VQB8 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC8.75□□□□□ -1.01
NpcdF8VQB8 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC8.75□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms