Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Gm37295-201ENSMUST00000192186 109 ntBASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Gm37349-201ENSMUST00000194205 624 ntBASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Gm42464-202ENSMUST00000198111 774 ntBASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Gm43542-201ENSMUST00000199505 379 ntBASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Gm7565-201ENSMUST00000203611 623 ntBASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Gm18599-201ENSMUST00000206729 1125 ntBASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Gm33926-201ENSMUST00000208755 357 ntTSL 2 BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Gm44982-201ENSMUST00000208795 471 ntBASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 2310008N11Rik-202ENSMUST00000210263 422 ntTSL 3 BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 AC092710.1-201ENSMUST00000221005 192 ntBASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 CT009765.2-201ENSMUST00000221331 392 ntBASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Gm2915-201ENSMUST00000222565 787 ntBASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 AC154785.1-201ENSMUST00000223280 572 ntBASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 AC154250.1-201ENSMUST00000224775 489 ntBASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 AC129537.1-202ENSMUST00000226619 430 ntBASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Olfr890-201ENSMUST00000079804 945 ntBASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Zim1-202ENSMUST00000122432 3060 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Gm34294-201ENSMUST00000191912 4263 ntBASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 AC192333.5-201ENSMUST00000224620 2350 ntBASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Gm33035-201ENSMUST00000219854 1718 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Klf5-202ENSMUST00000226784 2852 ntBASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Gm6767-201ENSMUST00000118650 1381 ntBASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Gm12346-201ENSMUST00000121455 2255 ntBASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Mup1-202ENSMUST00000103012 927 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Gm24071-201ENSMUST00000104520 132 ntBASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Mup16-202ENSMUST00000107483 927 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Mup17-201ENSMUST00000107484 927 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Gm12445-201ENSMUST00000117947 885 ntBASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Gm15040-201ENSMUST00000118561 1241 ntBASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Gm11907-201ENSMUST00000118918 1007 ntBASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Gm15753-201ENSMUST00000119241 1062 ntBASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Gm12124-201ENSMUST00000120504 679 ntBASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Mllt3-208ENSMUST00000149357 794 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Gm25721-201ENSMUST00000157496 171 ntBASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Gm23387-201ENSMUST00000158586 107 ntBASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Mir6415-201ENSMUST00000184064 100 ntBASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Gm29356-201ENSMUST00000186935 373 ntBASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Gm37578-201ENSMUST00000192256 1177 ntBASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Gm6236-201ENSMUST00000193785 1009 ntBASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Gm18689-201ENSMUST00000203969 902 ntBASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 AC139579.1-201ENSMUST00000214560 606 ntTSL 3 BASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Gm33778-201ENSMUST00000216884 704 ntBASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 AC117656.3-204ENSMUST00000225656 859 ntBASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 AC121997.2-202ENSMUST00000227158 939 ntBASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Pcdh1F7BJK1 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms