Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Gm44121-201ENSMUST00000205169 2006 ntBASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Gm37780-201ENSMUST00000194117 1873 ntBASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Gm6101-201ENSMUST00000195384 1867 ntBASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 AC174797.5-201ENSMUST00000225055 1860 ntBASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 AC158988.1-201ENSMUST00000226731 2624 ntBASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 AC159002.2-201ENSMUST00000228843 4874 ntBASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 AC161884.1-201ENSMUST00000225436 2174 ntBASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Gm26016-201ENSMUST00000104403 129 ntBASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Gm12306-201ENSMUST00000117256 171 ntBASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Gm11926-201ENSMUST00000118520 430 ntBASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Mir7084-201ENSMUST00000183876 70 ntBASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Gm6472-202ENSMUST00000187973 582 ntBASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Gm36935-201ENSMUST00000192526 292 ntBASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Gm36638-201ENSMUST00000193295 400 ntBASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Gm18428-201ENSMUST00000194986 791 ntBASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Gm42580-201ENSMUST00000197223 753 ntBASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Gm24826-202ENSMUST00000197298 216 ntBASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Gm8924-201ENSMUST00000197405 1132 ntBASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Gm17833-201ENSMUST00000197629 1065 ntBASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Gm21040-201ENSMUST00000199493 1132 ntBASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Gm43040-201ENSMUST00000202399 558 ntBASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Gm44590-201ENSMUST00000206161 391 ntBASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Gm44623-201ENSMUST00000207934 434 ntBASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Gm17611-202ENSMUST00000220613 814 ntBASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 B230303A05Rik-202ENSMUST00000220728 478 ntBASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 AC139941.1-201ENSMUST00000221517 478 ntBASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 CT030260.1-201ENSMUST00000223243 442 ntBASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Zmym2-202ENSMUST00000223669 1281 ntBASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 AC161374.1-201ENSMUST00000224191 794 ntBASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 AC165287.1-201ENSMUST00000224985 178 ntBASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 AC187103.4-201ENSMUST00000225399 300 ntBASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 AC161877.2-201ENSMUST00000226248 545 ntBASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Snora21-201ENSMUST00000082967 137 ntBASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 AC163660.4-201ENSMUST00000224983 2171 ntBASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Gm44676-201ENSMUST00000208520 3055 ntBASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 AC132465.1-201ENSMUST00000219938 1307 ntBASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ddx56Q9D0R4 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Gm37959-201ENSMUST00000191700 2897 ntBASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Gm9521-201ENSMUST00000206656 1516 ntBASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 213.3 ms