Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm7091-201ENSMUST00000116438 586 ntBASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Gm14893-201ENSMUST00000117904 282 ntBASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Gm11498-201ENSMUST00000120660 949 ntBASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Gm25455-201ENSMUST00000157946 325 ntBASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Gm3326-201ENSMUST00000164656 1043 ntBASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Gm8164-201ENSMUST00000169120 1192 ntBASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Commd3-212ENSMUST00000171845 938 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Trav9n-3-201ENSMUST00000177705 575 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Trav9d-3-201ENSMUST00000178252 575 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 1700015G11Rik-201ENSMUST00000180038 397 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Gm8167-201ENSMUST00000183320 958 ntBASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Mir6940-201ENSMUST00000183447 70 ntBASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Gm5734-201ENSMUST00000189787 913 ntBASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Scp2-ps1-201ENSMUST00000193152 499 ntBASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Igkv8-34-201ENSMUST00000196959 365 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Gm43699-201ENSMUST00000201312 818 ntTSL 3 BASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 RMST_1.1-214ENSMUST00000220389 633 ntTSL 2 BASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Gm7762-201ENSMUST00000220595 604 ntTSL 3 BASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 AC154760.1-201ENSMUST00000227218 673 ntBASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 4930415O20Rik-201ENSMUST00000023728 558 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Tmem216-201ENSMUST00000025569 1101 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Tmem225-201ENSMUST00000046333 993 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Klk1b3-201ENSMUST00000085450 889 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Gm10805-201ENSMUST00000099710 399 ntBASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 AC154755.2-201ENSMUST00000224384 2857 ntBASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Gm15425-201ENSMUST00000119013 2711 ntBASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Gm44255-201ENSMUST00000203456 2053 ntBASIC8.14□□□□□ -1.11
Ccdc9Q8VC31 Gm14988-201ENSMUST00000117224 1548 ntBASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm37717-201ENSMUST00000192647 3027 ntBASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm43637-201ENSMUST00000202206 2926 ntBASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Cdk2ap1-203ENSMUST00000111473 715 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm15836-201ENSMUST00000119952 793 ntBASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm24994-201ENSMUST00000157414 121 ntBASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm20627-202ENSMUST00000176275 564 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm20617-201ENSMUST00000177082 717 ntTSL 3 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Mir6919-201ENSMUST00000185146 62 ntBASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm27680-202ENSMUST00000199221 807 ntBASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Olfr214-202ENSMUST00000203867 1255 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm33096-201ENSMUST00000210189 493 ntBASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 AC136376.1-201ENSMUST00000228496 950 ntBASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm9837-201ENSMUST00000057722 731 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Glipr1-201ENSMUST00000074805 1081 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms