Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm6056-201ENSMUST00000221253 488 ntBASIC6.13□□□□□ -1.43
Col6a6Q8C6K9 CT009711.4-201ENSMUST00000225685 198 ntBASIC6.13□□□□□ -1.43
Col6a6Q8C6K9 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Col6a6Q8C6K9 AC113125.2-201ENSMUST00000226837 362 ntBASIC6.13□□□□□ -1.43
Col6a6Q8C6K9 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col6a6Q8C6K9 Olfr467-201ENSMUST00000084756 927 ntBASIC6.13□□□□□ -1.43
Col6a6Q8C6K9 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col6a6Q8C6K9 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col6a6Q8C6K9 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col6a6Q8C6K9 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 RMST_1.1-209ENSMUST00000219444 2679 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 3110035E14Rik-201ENSMUST00000088666 3256 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Gm43766-201ENSMUST00000200590 5417 ntBASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Gm13702-201ENSMUST00000118542 825 ntBASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Gm11581-201ENSMUST00000122024 763 ntBASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Gm9428-201ENSMUST00000127214 769 ntBASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Gm23674-201ENSMUST00000157473 131 ntBASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Gm22262-201ENSMUST00000158713 86 ntBASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Gm27853-201ENSMUST00000184176 250 ntBASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Gm29470-201ENSMUST00000188007 696 ntBASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Gm45185-201ENSMUST00000207556 404 ntBASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Gm9535-201ENSMUST00000218499 768 ntBASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 AC122290.1-201ENSMUST00000225631 1078 ntBASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Gm23456-201ENSMUST00000083335 137 ntBASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Gsdmc-202ENSMUST00000173503 2375 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Gm37647-201ENSMUST00000194556 3143 ntBASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Gm37735-201ENSMUST00000193995 1406 ntBASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Pecam1-203ENSMUST00000103069 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a6Q8C6K9 Gm13400-201ENSMUST00000117436 380 ntBASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Gm20615-201ENSMUST00000177503 705 ntBASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Gm28377-201ENSMUST00000189695 720 ntBASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Gm28620-201ENSMUST00000190463 439 ntBASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Gm37322-201ENSMUST00000193409 337 ntBASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 AL669819.1-201ENSMUST00000225143 330 ntBASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Olfr338-203ENSMUST00000217511 5724 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Tec-203ENSMUST00000113594 2580 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Zdhhc22-202ENSMUST00000222543 3462 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 9330136K24Rik-201ENSMUST00000180842 2478 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Gm12262-201ENSMUST00000119915 305 ntBASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Gm27460-201ENSMUST00000184213 100 ntBASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 CT009713.5-201ENSMUST00000224508 909 ntBASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Atp8a1-207ENSMUST00000135930 8069 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Col6a6Q8C6K9 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms