Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Ccdc40Q8BI79 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ccdc40Q8BI79 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Ccdc40Q8BI79 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Ccdc40Q8BI79 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Ccdc40Q8BI79 AC130661.1-201ENSMUST00000218248 1680 ntBASIC7.16□□□□□ -1.26
Ccdc40Q8BI79 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 Gm37138-201ENSMUST00000194564 2089 ntBASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 AC158115.1-201ENSMUST00000222830 3182 ntBASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 AC159244.3-201ENSMUST00000222887 3153 ntBASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 Gm21955-201ENSMUST00000194137 4968 ntBASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 Gm25083-201ENSMUST00000102319 92 ntBASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 Gm8624-201ENSMUST00000118083 432 ntBASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 Gm14745-201ENSMUST00000118480 1096 ntBASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 Gm5135-201ENSMUST00000121100 573 ntBASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 Gm12477-201ENSMUST00000121221 571 ntBASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 Gm5809-201ENSMUST00000121854 529 ntBASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 Gm22035-201ENSMUST00000157284 228 ntBASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 Gm24228-201ENSMUST00000158829 129 ntBASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 Gm17212-201ENSMUST00000166666 259 ntBASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 Gm4373-201ENSMUST00000178571 556 ntBASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 Gm18501-201ENSMUST00000185363 664 ntBASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 Gm10416-201ENSMUST00000197379 645 ntBASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 Gm44722-201ENSMUST00000206473 436 ntBASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 Gm45343-201ENSMUST00000210452 828 ntBASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 Gm18655-201ENSMUST00000214802 1090 ntBASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 Gm46231-201ENSMUST00000220152 314 ntBASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 AC147245.1-201ENSMUST00000223294 677 ntBASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 AC138765.3-201ENSMUST00000227981 423 ntBASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ccdc40Q8BI79 Gm13106-201ENSMUST00000119045 1443 ntBASIC7.15□□□□□ -1.27
Ccdc40Q8BI79 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC7.15□□□□□ -1.27
Ccdc40Q8BI79 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Ccdc40Q8BI79 AC107232.1-201ENSMUST00000227785 1503 ntBASIC7.15□□□□□ -1.27
Ccdc40Q8BI79 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Ccdc40Q8BI79 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Ccdc40Q8BI79 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Ccdc40Q8BI79 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC7.15□□□□□ -1.27
Ccdc40Q8BI79 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC7.15□□□□□ -1.27
Ccdc40Q8BI79 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
Ccdc40Q8BI79 Gm37541-201ENSMUST00000192464 2315 ntBASIC7.15□□□□□ -1.27
Ccdc40Q8BI79 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Ccdc40Q8BI79 Gm11242-201ENSMUST00000120103 2457 ntBASIC7.15□□□□□ -1.27
Ccdc40Q8BI79 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Gm14659-201ENSMUST00000117667 843 ntBASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Gm14584-201ENSMUST00000118956 637 ntBASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Gm14869-201ENSMUST00000119007 884 ntBASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Gm7244-201ENSMUST00000164658 455 ntBASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Gm28413-201ENSMUST00000189369 291 ntBASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Gm4785-201ENSMUST00000191025 751 ntBASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Gm38373-201ENSMUST00000192042 288 ntBASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Gm43180-201ENSMUST00000197541 2886 ntBASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Gm18593-201ENSMUST00000200754 1139 ntBASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Gm42673-201ENSMUST00000202676 337 ntBASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Gm31663-202ENSMUST00000208481 1190 ntBASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Gm45100-201ENSMUST00000209153 391 ntBASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Nsd1-207ENSMUST00000224973 9905 ntBASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 AC134869.2-201ENSMUST00000225788 421 ntBASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 n-R5s29-201ENSMUST00000082836 119 ntBASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Gm26130-201ENSMUST00000083171 138 ntBASIC7.14□□□□□ -1.27
Ccdc40Q8BI79 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC7.14□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms