Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Gm18191-201ENSMUST00000174624 824 ntBASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Gm21045-201ENSMUST00000183058 1020 ntBASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Gm26915-201ENSMUST00000183080 748 ntBASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Calm5-201ENSMUST00000183198 589 ntBASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Gm8167-201ENSMUST00000183320 958 ntBASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Mir8097-201ENSMUST00000185150 119 ntBASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Gm40040-201ENSMUST00000196123 504 ntTSL 3 BASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Gm42808-201ENSMUST00000198212 285 ntTSL 5 BASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Gm18877-201ENSMUST00000207706 539 ntBASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Gm4548-201ENSMUST00000208487 509 ntBASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Gm19137-201ENSMUST00000213790 1164 ntBASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Gm46231-201ENSMUST00000220152 314 ntBASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 AC106830.2-201ENSMUST00000226624 943 ntBASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Olfr654-201ENSMUST00000098173 1155 ntBASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Gm42981-201ENSMUST00000200184 3252 ntBASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Gm16487-201ENSMUST00000105048 4037 ntBASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Ms4a13-201ENSMUST00000073380 1375 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Prom1-204ENSMUST00000087442 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Pik3cg-205ENSMUST00000217915 3340 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Prpf38bQ80SY5 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 Gm28813-201ENSMUST00000186293 1497 ntTSL 5 BASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 Gm29324-202ENSMUST00000188242 1497 ntTSL 5 BASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 Agtpbp1-206ENSMUST00000164215 4331 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 Gm4596-201ENSMUST00000117197 442 ntBASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 Gm14621-201ENSMUST00000117709 689 ntBASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 Gm16200-201ENSMUST00000120385 331 ntBASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 Gm12804-201ENSMUST00000121030 999 ntBASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 Mup-ps4-201ENSMUST00000151005 539 ntBASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 Gm8614-201ENSMUST00000182528 978 ntBASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 Gm5327-201ENSMUST00000182864 1009 ntBASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 Gm27602-201ENSMUST00000183861 111 ntBASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 Gm9541-201ENSMUST00000188409 502 ntBASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 Gm37191-201ENSMUST00000193346 388 ntBASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 Gm43848-201ENSMUST00000198060 1247 ntBASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 Igkv4-77-201ENSMUST00000199410 352 ntBASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 Olfr320-201ENSMUST00000204718 928 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 Gm45042-201ENSMUST00000207377 211 ntBASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 AC156795.1-201ENSMUST00000214655 414 ntBASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 AC166323.1-201ENSMUST00000217756 367 ntBASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 Gm19238-201ENSMUST00000221936 1260 ntBASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 AC073562.1-201ENSMUST00000222117 401 ntBASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 AC154552.5-201ENSMUST00000222352 207 ntBASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 AC151982.1-201ENSMUST00000223546 464 ntBASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 AC161537.1-202ENSMUST00000228450 868 ntBASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 2700046A07Rik-202ENSMUST00000067450 2101 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 Olfr51-201ENSMUST00000076514 924 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Prpf38bQ80SY5 Fcgr4-201ENSMUST00000078825 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms