Protein–RNA interactions for Protein: Q7TPM3

Trim17, E3 ubiquitin-protein ligase TRIM17, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17Q7TPM3 Gm26898-201ENSMUST00000181678 384 ntBASIC7.31□□□□□ -1.24
Trim17Q7TPM3 Gm8183-201ENSMUST00000183134 980 ntBASIC7.31□□□□□ -1.24
Trim17Q7TPM3 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
Trim17Q7TPM3 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC7.31□□□□□ -1.24
Trim17Q7TPM3 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC7.31□□□□□ -1.24
Trim17Q7TPM3 Gm2926-201ENSMUST00000205625 239 ntBASIC7.31□□□□□ -1.24
Trim17Q7TPM3 Gm44833-201ENSMUST00000208368 331 ntBASIC7.31□□□□□ -1.24
Trim17Q7TPM3 Gm45497-201ENSMUST00000211701 740 ntBASIC7.31□□□□□ -1.24
Trim17Q7TPM3 AC124778.1-201ENSMUST00000216013 162 ntBASIC7.31□□□□□ -1.24
Trim17Q7TPM3 Gm18620-201ENSMUST00000222295 324 ntBASIC7.31□□□□□ -1.24
Trim17Q7TPM3 AC123917.1-201ENSMUST00000228063 1048 ntBASIC7.31□□□□□ -1.24
Trim17Q7TPM3 AC154627.1-201ENSMUST00000228799 1286 ntBASIC7.31□□□□□ -1.24
Trim17Q7TPM3 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim17Q7TPM3 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Trim17Q7TPM3 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim17Q7TPM3 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim17Q7TPM3 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Trim17Q7TPM3 n-R5s217-201ENSMUST00000083341 116 ntBASIC7.31□□□□□ -1.24
Trim17Q7TPM3 Mir106b-201ENSMUST00000083580 82 ntBASIC7.31□□□□□ -1.24
Trim17Q7TPM3 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Trim17Q7TPM3 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim17Q7TPM3 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC7.31□□□□□ -1.24
Trim17Q7TPM3 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC7.31□□□□□ -1.24
Trim17Q7TPM3 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim17Q7TPM3 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim17Q7TPM3 AC122426.2-201ENSMUST00000216522 2947 ntBASIC7.31□□□□□ -1.24
Trim17Q7TPM3 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim17Q7TPM3 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Trim17Q7TPM3 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
Trim17Q7TPM3 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Trim17Q7TPM3 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC7.3□□□□□ -1.24
Trim17Q7TPM3 Gm38322-201ENSMUST00000194074 2300 ntBASIC7.3□□□□□ -1.24
Trim17Q7TPM3 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Trim17Q7TPM3 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC7.3□□□□□ -1.24
Trim17Q7TPM3 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim17Q7TPM3 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim17Q7TPM3 AC161247.1-201ENSMUST00000217744 2295 ntBASIC7.3□□□□□ -1.24
Trim17Q7TPM3 AC135119.1-204ENSMUST00000228036 2663 ntBASIC7.3□□□□□ -1.24
Trim17Q7TPM3 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Trim17Q7TPM3 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Trim17Q7TPM3 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim17Q7TPM3 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC7.3□□□□□ -1.24
Trim17Q7TPM3 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC7.3□□□□□ -1.24
Trim17Q7TPM3 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
Trim17Q7TPM3 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim17Q7TPM3 Gm5752-201ENSMUST00000117771 594 ntBASIC7.3□□□□□ -1.24
Trim17Q7TPM3 Gm5166-201ENSMUST00000121332 573 ntBASIC7.3□□□□□ -1.24
Trim17Q7TPM3 Gm12778-201ENSMUST00000122341 333 ntBASIC7.3□□□□□ -1.24
Trim17Q7TPM3 Gm24383-201ENSMUST00000122691 333 ntBASIC7.3□□□□□ -1.24
Trim17Q7TPM3 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC7.3□□□□□ -1.24
Trim17Q7TPM3 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC7.3□□□□□ -1.24
Trim17Q7TPM3 Mir1929-201ENSMUST00000158635 93 ntBASIC7.3□□□□□ -1.24
Trim17Q7TPM3 Gm5334-201ENSMUST00000187472 720 ntBASIC7.3□□□□□ -1.24
Trim17Q7TPM3 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim17Q7TPM3 Gm42752-201ENSMUST00000198394 1106 ntBASIC7.3□□□□□ -1.24
Trim17Q7TPM3 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC7.3□□□□□ -1.24
Trim17Q7TPM3 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Trim17Q7TPM3 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Trim17Q7TPM3 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Trim17Q7TPM3 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC7.3□□□□□ -1.24
Trim17Q7TPM3 AV026068-219ENSMUST00000224148 933 ntBASIC7.3□□□□□ -1.24
Trim17Q7TPM3 CT009711.2-201ENSMUST00000225352 934 ntBASIC7.3□□□□□ -1.24
Trim17Q7TPM3 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Trim17Q7TPM3 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Trim17Q7TPM3 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim17Q7TPM3 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Trim17Q7TPM3 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim17Q7TPM3 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim17Q7TPM3 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC7.3□□□□□ -1.24
Trim17Q7TPM3 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim17Q7TPM3 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim17Q7TPM3 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Trim17Q7TPM3 Gm43189-201ENSMUST00000196040 3069 ntBASIC7.29□□□□□ -1.24
Trim17Q7TPM3 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim17Q7TPM3 Sec24c-202ENSMUST00000223751 4196 ntBASIC7.29□□□□□ -1.24
Trim17Q7TPM3 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
Trim17Q7TPM3 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim17Q7TPM3 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim17Q7TPM3 Gm22374-201ENSMUST00000104583 132 ntBASIC7.29□□□□□ -1.24
Trim17Q7TPM3 Gm13940-201ENSMUST00000121023 301 ntBASIC7.29□□□□□ -1.24
Trim17Q7TPM3 Gm11472-201ENSMUST00000121305 556 ntBASIC7.29□□□□□ -1.24
Trim17Q7TPM3 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Trim17Q7TPM3 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC7.29□□□□□ -1.24
Trim17Q7TPM3 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Trim17Q7TPM3 Gm5272-201ENSMUST00000182730 982 ntBASIC7.29□□□□□ -1.24
Trim17Q7TPM3 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC7.29□□□□□ -1.24
Trim17Q7TPM3 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC7.29□□□□□ -1.24
Trim17Q7TPM3 Gm44342-201ENSMUST00000196874 129 ntBASIC7.29□□□□□ -1.24
Trim17Q7TPM3 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Trim17Q7TPM3 Gm44383-201ENSMUST00000198940 129 ntBASIC7.29□□□□□ -1.24
Trim17Q7TPM3 Gm44411-201ENSMUST00000204172 349 ntBASIC7.29□□□□□ -1.24
Trim17Q7TPM3 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim17Q7TPM3 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Trim17Q7TPM3 Gm2221-201ENSMUST00000209342 418 ntBASIC7.29□□□□□ -1.24
Trim17Q7TPM3 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC7.29□□□□□ -1.24
Trim17Q7TPM3 Gm18040-201ENSMUST00000217922 827 ntBASIC7.29□□□□□ -1.24
Trim17Q7TPM3 AC164295.1-201ENSMUST00000224861 186 ntBASIC7.29□□□□□ -1.24
Trim17Q7TPM3 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Trim17Q7TPM3 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim17Q7TPM3 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms