Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC7.13□□□□□ -1.27
Scaf4Q6PFF0 Gm5080-201ENSMUST00000220341 743 ntBASIC7.13□□□□□ -1.27
Scaf4Q6PFF0 Nsa2-203ENSMUST00000225410 974 ntBASIC7.13□□□□□ -1.27
Scaf4Q6PFF0 AC138604.2-201ENSMUST00000226620 921 ntBASIC7.13□□□□□ -1.27
Scaf4Q6PFF0 Cst13-201ENSMUST00000046589 783 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Scaf4Q6PFF0 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Scaf4Q6PFF0 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
Scaf4Q6PFF0 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Scaf4Q6PFF0 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
Scaf4Q6PFF0 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Scaf4Q6PFF0 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Scaf4Q6PFF0 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Scaf4Q6PFF0 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Scaf4Q6PFF0 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Scaf4Q6PFF0 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Scaf4Q6PFF0 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Scaf4Q6PFF0 Gm19801-201ENSMUST00000218231 1882 ntBASIC7.13□□□□□ -1.27
Scaf4Q6PFF0 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Scaf4Q6PFF0 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 AC120347.1-201ENSMUST00000223326 1639 ntBASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Gm5583-201ENSMUST00000174328 1519 ntBASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Gm27013-202ENSMUST00000205067 1436 ntBASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Igkv12-41-201ENSMUST00000103369 347 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Scgb1b7-201ENSMUST00000108097 419 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Gm12477-201ENSMUST00000121221 571 ntBASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Gm25265-201ENSMUST00000158520 347 ntBASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Gm17122-201ENSMUST00000166047 372 ntTSL 5 BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Scgb2b20-201ENSMUST00000179248 523 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Mir8099-2-201ENSMUST00000183568 127 ntBASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Mir8099-1-201ENSMUST00000184238 127 ntBASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Scgb2b18-201ENSMUST00000186529 523 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Scgb2b11-201ENSMUST00000188293 523 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Tmigd3-206ENSMUST00000199977 838 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Gm7565-201ENSMUST00000203611 623 ntBASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Gm43967-201ENSMUST00000203787 301 ntBASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 AC131745.3-201ENSMUST00000223582 554 ntBASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Apoc2-201ENSMUST00000003074 631 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Defb3-201ENSMUST00000033852 275 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Gm22053-201ENSMUST00000083394 200 ntBASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Olfr1497-202ENSMUST00000217384 1672 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Scaf4Q6PFF0 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Scaf4Q6PFF0 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Scaf4Q6PFF0 Gm14445-201ENSMUST00000117051 1484 ntBASIC7.11□□□□□ -1.27
Scaf4Q6PFF0 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Scaf4Q6PFF0 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Scaf4Q6PFF0 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC7.11□□□□□ -1.27
Scaf4Q6PFF0 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC7.11□□□□□ -1.27
Scaf4Q6PFF0 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Scaf4Q6PFF0 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Scaf4Q6PFF0 AC164297.4-201ENSMUST00000224225 1307 ntBASIC7.11□□□□□ -1.27
Scaf4Q6PFF0 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC7.11□□□□□ -1.27
Scaf4Q6PFF0 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Scaf4Q6PFF0 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Scaf4Q6PFF0 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Scaf4Q6PFF0 Gm12365-201ENSMUST00000117931 568 ntBASIC7.11□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 193.5 ms