Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Trim43aQ3TL54 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Trim43aQ3TL54 AC156636.2-201ENSMUST00000218845 4557 ntBASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Gm11864-201ENSMUST00000116179 1220 ntBASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Gm14279-201ENSMUST00000117142 332 ntBASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Gm10243-201ENSMUST00000117571 333 ntBASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Gm14631-201ENSMUST00000119067 594 ntBASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Gm11338-201ENSMUST00000120086 1160 ntBASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Gm22025-201ENSMUST00000122734 302 ntBASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC7.16□□□□□ -1.26
Trim43aQ3TL54 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Gm22702-201ENSMUST00000175372 69 ntBASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Gm26179-201ENSMUST00000177723 132 ntBASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Gm5787-201ENSMUST00000183049 1038 ntBASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Mir6769b-201ENSMUST00000184793 60 ntBASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Gm37493-201ENSMUST00000193167 433 ntBASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim43aQ3TL54 AC131654.1-201ENSMUST00000219675 745 ntBASIC7.16□□□□□ -1.26
Trim43aQ3TL54 AC133598.4-201ENSMUST00000224577 454 ntBASIC7.16□□□□□ -1.26
Trim43aQ3TL54 AC154692.1-202ENSMUST00000226632 1231 ntBASIC7.16□□□□□ -1.26
Trim43aQ3TL54 AC135292.2-201ENSMUST00000227559 367 ntBASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Gm10247-201ENSMUST00000090395 333 ntBASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim43aQ3TL54 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Trim43aQ3TL54 AC165260.6-206ENSMUST00000223884 3698 ntBASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Gm42975-201ENSMUST00000200612 1491 ntBASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Trim43aQ3TL54 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Trim43aQ3TL54 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC7.15□□□□□ -1.26
Trim43aQ3TL54 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim43aQ3TL54 AC131747.2-201ENSMUST00000226121 1895 ntBASIC7.15□□□□□ -1.26
Trim43aQ3TL54 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim43aQ3TL54 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim43aQ3TL54 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim43aQ3TL54 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC7.15□□□□□ -1.26
Trim43aQ3TL54 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC7.15□□□□□ -1.26
Trim43aQ3TL54 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim43aQ3TL54 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC7.15□□□□□ -1.26
Trim43aQ3TL54 Gm37535-201ENSMUST00000194442 2365 ntBASIC7.15□□□□□ -1.26
Trim43aQ3TL54 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
Trim43aQ3TL54 Gm13414-201ENSMUST00000117516 727 ntBASIC7.15□□□□□ -1.26
Trim43aQ3TL54 Gm12879-201ENSMUST00000120003 1182 ntBASIC7.15□□□□□ -1.26
Trim43aQ3TL54 Gm11498-201ENSMUST00000120660 949 ntBASIC7.15□□□□□ -1.26
Trim43aQ3TL54 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
Trim43aQ3TL54 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC7.15□□□□□ -1.26
Trim43aQ3TL54 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Trim43aQ3TL54 Gm7651-201ENSMUST00000173398 901 ntBASIC7.15□□□□□ -1.26
Trim43aQ3TL54 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC7.15□□□□□ -1.26
Trim43aQ3TL54 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trim43aQ3TL54 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trim43aQ3TL54 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim43aQ3TL54 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trim43aQ3TL54 Gm17847-201ENSMUST00000188261 1127 ntBASIC7.15□□□□□ -1.26
Trim43aQ3TL54 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC7.15□□□□□ -1.26
Trim43aQ3TL54 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC7.15□□□□□ -1.26
Trim43aQ3TL54 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC7.15□□□□□ -1.26
Trim43aQ3TL54 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC7.15□□□□□ -1.26
Trim43aQ3TL54 Gm44931-201ENSMUST00000206056 545 ntBASIC7.15□□□□□ -1.26
Trim43aQ3TL54 AC127224.1-201ENSMUST00000218094 453 ntBASIC7.15□□□□□ -1.26
Trim43aQ3TL54 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trim43aQ3TL54 AC150661.1-201ENSMUST00000222563 495 ntBASIC7.15□□□□□ -1.26
Trim43aQ3TL54 AC121542.2-201ENSMUST00000227529 400 ntBASIC7.15□□□□□ -1.26
Trim43aQ3TL54 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim43aQ3TL54 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim43aQ3TL54 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Trim43aQ3TL54 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trim43aQ3TL54 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim43aQ3TL54 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC7.15□□□□□ -1.26
Trim43aQ3TL54 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms