Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm22342-201ENSMUST00000122647 298 ntBASIC5.96□□□□□ -1.46
Nkx3-1P97436 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC5.96□□□□□ -1.46
Nkx3-1P97436 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Nkx3-1P97436 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC5.96□□□□□ -1.46
Nkx3-1P97436 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC5.96□□□□□ -1.46
Nkx3-1P97436 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Nkx3-1P97436 AC122844.1-201ENSMUST00000195971 107 ntBASIC5.96□□□□□ -1.46
Nkx3-1P97436 Gm9504-201ENSMUST00000196322 468 ntBASIC5.96□□□□□ -1.46
Nkx3-1P97436 Gm42580-201ENSMUST00000197223 753 ntBASIC5.96□□□□□ -1.46
Nkx3-1P97436 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC5.96□□□□□ -1.46
Nkx3-1P97436 Gm19088-201ENSMUST00000198800 566 ntBASIC5.96□□□□□ -1.46
Nkx3-1P97436 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC5.96□□□□□ -1.46
Nkx3-1P97436 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Nkx3-1P97436 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC5.96□□□□□ -1.46
Nkx3-1P97436 Gm44162-201ENSMUST00000203543 544 ntBASIC5.96□□□□□ -1.46
Nkx3-1P97436 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC5.96□□□□□ -1.46
Nkx3-1P97436 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC5.96□□□□□ -1.46
Nkx3-1P97436 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC5.96□□□□□ -1.46
Nkx3-1P97436 CT009738.1-201ENSMUST00000219031 809 ntBASIC5.96□□□□□ -1.46
Nkx3-1P97436 Gm7441-201ENSMUST00000220697 1074 ntBASIC5.96□□□□□ -1.46
Nkx3-1P97436 Gm46379-201ENSMUST00000222551 265 ntBASIC5.96□□□□□ -1.46
Nkx3-1P97436 AW822073-201ENSMUST00000075305 555 ntBASIC5.96□□□□□ -1.46
Nkx3-1P97436 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC5.96□□□□□ -1.46
Nkx3-1P97436 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Nkx3-1P97436 Gm34294-201ENSMUST00000191912 4263 ntBASIC5.96□□□□□ -1.46
Nkx3-1P97436 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Nkx3-1P97436 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
Nkx3-1P97436 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC5.96□□□□□ -1.46
Nkx3-1P97436 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Nkx3-1P97436 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Nkx3-1P97436 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Nkx3-1P97436 Gm44021-201ENSMUST00000203055 3516 ntBASIC5.96□□□□□ -1.46
Nkx3-1P97436 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Nkx3-1P97436 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Nkx3-1P97436 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Nkx3-1P97436 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Nkx3-1P97436 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
Nkx3-1P97436 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Nkx3-1P97436 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Nkx3-1P97436 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Nkx3-1P97436 Gm42478-201ENSMUST00000199252 1467 ntBASIC5.96□□□□□ -1.46
Nkx3-1P97436 Gm44130-201ENSMUST00000205157 3004 ntBASIC5.96□□□□□ -1.46
Nkx3-1P97436 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nkx3-1P97436 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Nkx3-1P97436 Gm44101-201ENSMUST00000203951 2221 ntBASIC5.95□□□□□ -1.46
Nkx3-1P97436 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nkx3-1P97436 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Nkx3-1P97436 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nkx3-1P97436 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC5.95□□□□□ -1.46
Nkx3-1P97436 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Nkx3-1P97436 Gm42630-201ENSMUST00000195908 3448 ntBASIC5.95□□□□□ -1.46
Nkx3-1P97436 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nkx3-1P97436 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nkx3-1P97436 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Nkx3-1P97436 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nkx3-1P97436 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Nkx3-1P97436 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Nkx3-1P97436 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nkx3-1P97436 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nkx3-1P97436 Gm15216-201ENSMUST00000118058 277 ntBASIC5.95□□□□□ -1.46
Nkx3-1P97436 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC5.95□□□□□ -1.46
Nkx3-1P97436 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC5.95□□□□□ -1.46
Nkx3-1P97436 Gm10693-201ENSMUST00000144146 2037 ntBASIC5.95□□□□□ -1.46
Nkx3-1P97436 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC5.95□□□□□ -1.46
Nkx3-1P97436 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Nkx3-1P97436 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Nkx3-1P97436 Gm29470-201ENSMUST00000188007 696 ntBASIC5.95□□□□□ -1.46
Nkx3-1P97436 Gm28846-201ENSMUST00000189161 368 ntBASIC5.95□□□□□ -1.46
Nkx3-1P97436 Gm412-201ENSMUST00000193360 948 ntBASIC5.95□□□□□ -1.46
Nkx3-1P97436 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nkx3-1P97436 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC5.95□□□□□ -1.46
Nkx3-1P97436 Gm43612-201ENSMUST00000196087 3207 ntBASIC5.95□□□□□ -1.46
Nkx3-1P97436 Gm19185-201ENSMUST00000196365 643 ntBASIC5.95□□□□□ -1.46
Nkx3-1P97436 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Nkx3-1P97436 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC5.95□□□□□ -1.46
Nkx3-1P97436 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC5.95□□□□□ -1.46
Nkx3-1P97436 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC5.95□□□□□ -1.46
Nkx3-1P97436 Gm7413-201ENSMUST00000219498 462 ntBASIC5.95□□□□□ -1.46
Nkx3-1P97436 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Nkx3-1P97436 AC154558.1-201ENSMUST00000222278 415 ntBASIC5.95□□□□□ -1.46
Nkx3-1P97436 AC163684.1-201ENSMUST00000223766 927 ntBASIC5.95□□□□□ -1.46
Nkx3-1P97436 AC105324.1-201ENSMUST00000227844 386 ntBASIC5.95□□□□□ -1.46
Nkx3-1P97436 AC125405.2-201ENSMUST00000227862 383 ntBASIC5.95□□□□□ -1.46
Nkx3-1P97436 AC138765.3-201ENSMUST00000227981 423 ntBASIC5.95□□□□□ -1.46
Nkx3-1P97436 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nkx3-1P97436 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Nkx3-1P97436 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nkx3-1P97436 Gm2531-201ENSMUST00000075609 512 ntBASIC5.95□□□□□ -1.46
Nkx3-1P97436 Gm24621-201ENSMUST00000082679 140 ntBASIC5.95□□□□□ -1.46
Nkx3-1P97436 Gm45516-201ENSMUST00000211588 4182 ntBASIC5.95□□□□□ -1.46
Nkx3-1P97436 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Nkx3-1P97436 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC5.95□□□□□ -1.46
Nkx3-1P97436 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nkx3-1P97436 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nkx3-1P97436 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Nkx3-1P97436 Gm37033-201ENSMUST00000193199 7350 ntBASIC5.95□□□□□ -1.46
Nkx3-1P97436 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nkx3-1P97436 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
Nkx3-1P97436 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Nkx3-1P97436 Gm37786-201ENSMUST00000191714 3225 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms