Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm12242-201ENSMUST00000118824 738 ntBASIC7.43□□□□□ -1.22
CiitaP79621 Gm5601-201ENSMUST00000118909 972 ntBASIC7.43□□□□□ -1.22
CiitaP79621 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
CiitaP79621 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CiitaP79621 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC7.43□□□□□ -1.22
CiitaP79621 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC7.43□□□□□ -1.22
CiitaP79621 Gm23276-201ENSMUST00000157913 138 ntBASIC7.43□□□□□ -1.22
CiitaP79621 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC7.43□□□□□ -1.22
CiitaP79621 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC7.43□□□□□ -1.22
CiitaP79621 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC7.43□□□□□ -1.22
CiitaP79621 Gm29357-201ENSMUST00000186877 698 ntBASIC7.43□□□□□ -1.22
CiitaP79621 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC7.43□□□□□ -1.22
CiitaP79621 Gm4751-201ENSMUST00000200620 1105 ntBASIC7.43□□□□□ -1.22
CiitaP79621 Gm43929-201ENSMUST00000203025 409 ntBASIC7.43□□□□□ -1.22
CiitaP79621 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC7.43□□□□□ -1.22
CiitaP79621 Gm44111-201ENSMUST00000204649 399 ntBASIC7.43□□□□□ -1.22
CiitaP79621 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC7.43□□□□□ -1.22
CiitaP79621 Gm5928-201ENSMUST00000221839 466 ntBASIC7.43□□□□□ -1.22
CiitaP79621 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CiitaP79621 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CiitaP79621 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CiitaP79621 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
CiitaP79621 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC7.43□□□□□ -1.22
CiitaP79621 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CiitaP79621 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CiitaP79621 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
CiitaP79621 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CiitaP79621 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CiitaP79621 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
CiitaP79621 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
CiitaP79621 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CiitaP79621 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
CiitaP79621 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
CiitaP79621 Gm44194-201ENSMUST00000204222 3229 ntBASIC7.42□□□□□ -1.22
CiitaP79621 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC7.42□□□□□ -1.22
CiitaP79621 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CiitaP79621 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
CiitaP79621 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC7.42□□□□□ -1.22
CiitaP79621 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CiitaP79621 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
CiitaP79621 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CiitaP79621 Gm6181-201ENSMUST00000117187 264 ntBASIC7.42□□□□□ -1.22
CiitaP79621 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC7.42□□□□□ -1.22
CiitaP79621 Gm22990-201ENSMUST00000175427 89 ntBASIC7.42□□□□□ -1.22
CiitaP79621 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CiitaP79621 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CiitaP79621 Gm27804-201ENSMUST00000185135 119 ntBASIC7.42□□□□□ -1.22
CiitaP79621 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CiitaP79621 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC7.42□□□□□ -1.22
CiitaP79621 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC7.42□□□□□ -1.22
CiitaP79621 Gm21461-201ENSMUST00000200382 863 ntBASIC7.42□□□□□ -1.22
CiitaP79621 Gm17834-201ENSMUST00000204322 891 ntBASIC7.42□□□□□ -1.22
CiitaP79621 Gm44823-201ENSMUST00000204775 1107 ntBASIC7.42□□□□□ -1.22
CiitaP79621 Gm9367-201ENSMUST00000205703 546 ntBASIC7.42□□□□□ -1.22
CiitaP79621 AC165349.1-201ENSMUST00000217896 424 ntBASIC7.42□□□□□ -1.22
CiitaP79621 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC7.42□□□□□ -1.22
CiitaP79621 CT030238.4-202ENSMUST00000226143 745 ntBASIC7.42□□□□□ -1.22
CiitaP79621 AC156016.2-201ENSMUST00000228200 525 ntBASIC7.42□□□□□ -1.22
CiitaP79621 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
CiitaP79621 AC124516.2-201ENSMUST00000221455 1829 ntBASIC7.42□□□□□ -1.22
CiitaP79621 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CiitaP79621 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC7.42□□□□□ -1.22
CiitaP79621 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC7.42□□□□□ -1.22
CiitaP79621 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
CiitaP79621 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC7.42□□□□□ -1.22
CiitaP79621 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CiitaP79621 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CiitaP79621 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CiitaP79621 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CiitaP79621 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC7.42□□□□□ -1.22
CiitaP79621 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CiitaP79621 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
CiitaP79621 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CiitaP79621 Gm43029-201ENSMUST00000201829 1535 ntBASIC7.42□□□□□ -1.22
CiitaP79621 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CiitaP79621 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC7.42□□□□□ -1.22
CiitaP79621 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
CiitaP79621 Gm42653-201ENSMUST00000200644 2839 ntBASIC7.42□□□□□ -1.22
CiitaP79621 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CiitaP79621 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC7.41□□□□□ -1.22
CiitaP79621 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CiitaP79621 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC7.41□□□□□ -1.22
CiitaP79621 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CiitaP79621 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
CiitaP79621 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CiitaP79621 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
CiitaP79621 Gm42611-201ENSMUST00000199446 3407 ntBASIC7.41□□□□□ -1.22
CiitaP79621 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
CiitaP79621 AC122828.2-201ENSMUST00000222511 2880 ntBASIC7.41□□□□□ -1.22
CiitaP79621 AC144772.2-201ENSMUST00000228830 2859 ntBASIC7.41□□□□□ -1.22
CiitaP79621 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CiitaP79621 Gm23748-201ENSMUST00000104227 131 ntBASIC7.41□□□□□ -1.22
CiitaP79621 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
CiitaP79621 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC7.41□□□□□ -1.22
CiitaP79621 Gm13740-201ENSMUST00000120590 310 ntBASIC7.41□□□□□ -1.22
CiitaP79621 Gm12400-201ENSMUST00000120915 1003 ntBASIC7.41□□□□□ -1.22
CiitaP79621 Gm14613-201ENSMUST00000122239 752 ntBASIC7.41□□□□□ -1.22
CiitaP79621 Gm21990-201ENSMUST00000124692 383 ntBASIC7.41□□□□□ -1.22
CiitaP79621 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CiitaP79621 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC7.41□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms