Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm17137-202ENSMUST00000165729 957 ntBASIC9.14□□□□□ -0.95
Nphp4P59240 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC9.14□□□□□ -0.95
Nphp4P59240 Gm23632-201ENSMUST00000175289 125 ntBASIC9.14□□□□□ -0.95
Nphp4P59240 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Nphp4P59240 Gm27853-201ENSMUST00000184176 250 ntBASIC9.14□□□□□ -0.95
Nphp4P59240 Gm18700-201ENSMUST00000185791 553 ntBASIC9.14□□□□□ -0.95
Nphp4P59240 Gm28455-201ENSMUST00000189105 1290 ntBASIC9.14□□□□□ -0.95
Nphp4P59240 Gm9710-201ENSMUST00000198053 499 ntBASIC9.14□□□□□ -0.95
Nphp4P59240 Gm43748-201ENSMUST00000202329 1233 ntBASIC9.14□□□□□ -0.95
Nphp4P59240 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC9.14□□□□□ -0.95
Nphp4P59240 Gm46364-201ENSMUST00000218548 319 ntBASIC9.14□□□□□ -0.95
Nphp4P59240 AC154861.1-201ENSMUST00000223767 800 ntBASIC9.14□□□□□ -0.95
Nphp4P59240 AC168062.1-201ENSMUST00000228048 769 ntBASIC9.14□□□□□ -0.95
Nphp4P59240 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Nphp4P59240 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Nphp4P59240 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC9.13□□□□□ -0.95
Nphp4P59240 Gm37310-201ENSMUST00000195237 2968 ntBASIC9.13□□□□□ -0.95
Nphp4P59240 Myh10-201ENSMUST00000018887 7667 ntTSL 5 BASIC9.13□□□□□ -0.95
Nphp4P59240 Gm3234-201ENSMUST00000222644 5061 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Nphp4P59240 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Nphp4P59240 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC9.13□□□□□ -0.95
Nphp4P59240 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Nphp4P59240 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Nphp4P59240 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Nphp4P59240 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Nphp4P59240 Gm44620-201ENSMUST00000209183 2887 ntBASIC9.13□□□□□ -0.95
Nphp4P59240 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC9.13□□□□□ -0.95
Nphp4P59240 Gm43176-201ENSMUST00000199653 2989 ntBASIC9.13□□□□□ -0.95
Nphp4P59240 Hist1h1d-201ENSMUST00000045301 7425 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Nphp4P59240 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Nphp4P59240 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Nphp4P59240 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Nphp4P59240 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Nphp4P59240 Plec-208ENSMUST00000080857 14959 ntTSL 5 BASIC9.13□□□□□ -0.95
Nphp4P59240 Plec-209ENSMUST00000089610 14972 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Nphp4P59240 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Nphp4P59240 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Nphp4P59240 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Nphp4P59240 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Nphp4P59240 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Nphp4P59240 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Nphp4P59240 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Nphp4P59240 Gm13222-201ENSMUST00000119638 138 ntBASIC9.13□□□□□ -0.95
Nphp4P59240 Gm15618-201ENSMUST00000121610 452 ntBASIC9.13□□□□□ -0.95
Nphp4P59240 Gm15696-201ENSMUST00000121730 445 ntBASIC9.13□□□□□ -0.95
Nphp4P59240 Gm22342-201ENSMUST00000122647 298 ntBASIC9.13□□□□□ -0.95
Nphp4P59240 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC9.13□□□□□ -0.95
Nphp4P59240 Gm22820-201ENSMUST00000157205 329 ntBASIC9.13□□□□□ -0.95
Nphp4P59240 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC9.13□□□□□ -0.95
Nphp4P59240 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Nphp4P59240 Gm43537-201ENSMUST00000199064 3110 ntBASIC9.13□□□□□ -0.95
Nphp4P59240 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Nphp4P59240 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC9.13□□□□□ -0.95
Nphp4P59240 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC9.13□□□□□ -0.95
Nphp4P59240 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC9.13□□□□□ -0.95
Nphp4P59240 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC9.13□□□□□ -0.95
Nphp4P59240 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Nphp4P59240 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Nphp4P59240 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Nphp4P59240 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Nphp4P59240 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC9.12□□□□□ -0.95
Nphp4P59240 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Nphp4P59240 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Nphp4P59240 Csmd2-205ENSMUST00000184063 13555 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Nphp4P59240 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Nphp4P59240 Ctnnd1-214ENSMUST00000111688 6146 ntTSL 5 BASIC9.12□□□□□ -0.95
Nphp4P59240 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Nphp4P59240 Gm37510-201ENSMUST00000194151 4762 ntBASIC9.12□□□□□ -0.95
Nphp4P59240 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Nphp4P59240 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Nphp4P59240 Gm42763-201ENSMUST00000199595 2087 ntBASIC9.12□□□□□ -0.95
Nphp4P59240 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Nphp4P59240 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Nphp4P59240 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Nphp4P59240 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Nphp4P59240 Cacna1d-209ENSMUST00000224785 8041 ntAPPRIS ALT2 BASIC9.12□□□□□ -0.95
Nphp4P59240 Sptbn1-203ENSMUST00000102838 9107 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Nphp4P59240 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Nphp4P59240 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Nphp4P59240 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Nphp4P59240 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Nphp4P59240 Gm13578-201ENSMUST00000120849 590 ntBASIC9.12□□□□□ -0.95
Nphp4P59240 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Nphp4P59240 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC9.12□□□□□ -0.95
Nphp4P59240 Gm23031-201ENSMUST00000157998 119 ntBASIC9.12□□□□□ -0.95
Nphp4P59240 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC9.12□□□□□ -0.95
Nphp4P59240 Mir5107-201ENSMUST00000175586 88 ntBASIC9.12□□□□□ -0.95
Nphp4P59240 Mir6367-201ENSMUST00000183385 102 ntBASIC9.12□□□□□ -0.95
Nphp4P59240 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Nphp4P59240 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Nphp4P59240 Gm28918-201ENSMUST00000188822 699 ntBASIC9.12□□□□□ -0.95
Nphp4P59240 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Nphp4P59240 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC9.12□□□□□ -0.95
Nphp4P59240 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC9.12□□□□□ -0.95
Nphp4P59240 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC9.12□□□□□ -0.95
Nphp4P59240 Gm45448-201ENSMUST00000211739 209 ntBASIC9.12□□□□□ -0.95
Nphp4P59240 Gm17997-201ENSMUST00000211801 840 ntBASIC9.12□□□□□ -0.95
Nphp4P59240 AC131654.1-201ENSMUST00000219675 745 ntBASIC9.12□□□□□ -0.95
Nphp4P59240 AC131187.2-201ENSMUST00000223936 994 ntBASIC9.12□□□□□ -0.95
Nphp4P59240 AC170086.2-201ENSMUST00000224733 803 ntBASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 134 ms