Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC6.6□□□□□ -1.35
Sox3P53784 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC6.6□□□□□ -1.35
Sox3P53784 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Sox3P53784 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
Sox3P53784 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Sox3P53784 AC139941.2-201ENSMUST00000221565 1824 ntBASIC6.6□□□□□ -1.35
Sox3P53784 Gm2108-201ENSMUST00000165058 2177 ntBASIC6.59□□□□□ -1.35
Sox3P53784 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Sox3P53784 Gm44769-201ENSMUST00000206120 2809 ntBASIC6.59□□□□□ -1.35
Sox3P53784 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Sox3P53784 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Sox3P53784 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Sox3P53784 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.35
Sox3P53784 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC6.59□□□□□ -1.35
Sox3P53784 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC6.59□□□□□ -1.35
Sox3P53784 Gm37611-201ENSMUST00000195250 2028 ntBASIC6.59□□□□□ -1.35
Sox3P53784 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Sox3P53784 Gm15950-201ENSMUST00000162902 1973 ntBASIC6.59□□□□□ -1.35
Sox3P53784 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Sox3P53784 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Sox3P53784 Gm14869-201ENSMUST00000119007 884 ntBASIC6.59□□□□□ -1.35
Sox3P53784 Gm11320-201ENSMUST00000119434 463 ntBASIC6.59□□□□□ -1.35
Sox3P53784 Gm14741-201ENSMUST00000120777 1009 ntBASIC6.59□□□□□ -1.35
Sox3P53784 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC6.59□□□□□ -1.35
Sox3P53784 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Sox3P53784 Gm22262-201ENSMUST00000158713 86 ntBASIC6.59□□□□□ -1.35
Sox3P53784 Gm9359-201ENSMUST00000163721 1221 ntBASIC6.59□□□□□ -1.35
Sox3P53784 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC6.59□□□□□ -1.35
Sox3P53784 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC6.59□□□□□ -1.35
Sox3P53784 Mir5617-201ENSMUST00000176786 57 ntBASIC6.59□□□□□ -1.35
Sox3P53784 Gm27030-201ENSMUST00000182551 464 ntBASIC6.59□□□□□ -1.35
Sox3P53784 Mir378d-201ENSMUST00000184232 110 ntBASIC6.59□□□□□ -1.35
Sox3P53784 Mir7037-201ENSMUST00000184414 65 ntBASIC6.59□□□□□ -1.35
Sox3P53784 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC6.59□□□□□ -1.35
Sox3P53784 Ighv1-10-201ENSMUST00000194372 355 ntBASIC6.59□□□□□ -1.35
Sox3P53784 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Sox3P53784 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC6.59□□□□□ -1.35
Sox3P53784 Gm44411-201ENSMUST00000204172 349 ntBASIC6.59□□□□□ -1.35
Sox3P53784 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC6.59□□□□□ -1.35
Sox3P53784 AC122305.2-201ENSMUST00000215148 834 ntBASIC6.59□□□□□ -1.35
Sox3P53784 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC6.59□□□□□ -1.35
Sox3P53784 AC157572.4-201ENSMUST00000228203 549 ntBASIC6.59□□□□□ -1.35
Sox3P53784 AC154627.1-201ENSMUST00000228799 1286 ntBASIC6.59□□□□□ -1.35
Sox3P53784 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Sox3P53784 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC6.59□□□□□ -1.35
Sox3P53784 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Sox3P53784 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Sox3P53784 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Sox3P53784 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC6.59□□□□□ -1.35
Sox3P53784 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Sox3P53784 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Sox3P53784 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Sox3P53784 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Sox3P53784 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Sox3P53784 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Sox3P53784 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Sox3P53784 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.36
Sox3P53784 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Sox3P53784 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Sox3P53784 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.36
Sox3P53784 Gm37289-201ENSMUST00000195409 1402 ntBASIC6.59□□□□□ -1.36
Sox3P53784 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Sox3P53784 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sox3P53784 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
Sox3P53784 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Sox3P53784 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Sox3P53784 Gm10307-201ENSMUST00000189839 1337 ntBASIC6.58□□□□□ -1.36
Sox3P53784 AC158115.1-201ENSMUST00000222830 3182 ntBASIC6.58□□□□□ -1.36
Sox3P53784 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC6.58□□□□□ -1.36
Sox3P53784 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Sox3P53784 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Sox3P53784 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
Sox3P53784 Gm24519-201ENSMUST00000104507 132 ntBASIC6.58□□□□□ -1.36
Sox3P53784 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sox3P53784 Gm13006-201ENSMUST00000118683 214 ntBASIC6.58□□□□□ -1.36
Sox3P53784 Gm11902-201ENSMUST00000118849 270 ntBASIC6.58□□□□□ -1.36
Sox3P53784 Gm12710-201ENSMUST00000119011 216 ntBASIC6.58□□□□□ -1.36
Sox3P53784 Gm12593-201ENSMUST00000120981 743 ntBASIC6.58□□□□□ -1.36
Sox3P53784 Gm15618-201ENSMUST00000121610 452 ntBASIC6.58□□□□□ -1.36
Sox3P53784 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC6.58□□□□□ -1.36
Sox3P53784 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC6.58□□□□□ -1.36
Sox3P53784 Gm4152-201ENSMUST00000172675 259 ntBASIC6.58□□□□□ -1.36
Sox3P53784 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC6.58□□□□□ -1.36
Sox3P53784 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC6.58□□□□□ -1.36
Sox3P53784 Gm36991-201ENSMUST00000191800 648 ntBASIC6.58□□□□□ -1.36
Sox3P53784 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sox3P53784 AC122844.1-201ENSMUST00000195971 107 ntBASIC6.58□□□□□ -1.36
Sox3P53784 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC6.58□□□□□ -1.36
Sox3P53784 Gm30517-201ENSMUST00000197350 772 ntBASIC6.58□□□□□ -1.36
Sox3P53784 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC6.58□□□□□ -1.36
Sox3P53784 Gm43725-201ENSMUST00000200122 369 ntBASIC6.58□□□□□ -1.36
Sox3P53784 Gm2602-201ENSMUST00000202112 571 ntBASIC6.58□□□□□ -1.36
Sox3P53784 Gm44422-201ENSMUST00000204142 1025 ntBASIC6.58□□□□□ -1.36
Sox3P53784 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC6.58□□□□□ -1.36
Sox3P53784 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC6.58□□□□□ -1.36
Sox3P53784 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC6.58□□□□□ -1.36
Sox3P53784 Gm33178-201ENSMUST00000212090 257 ntBASIC6.58□□□□□ -1.36
Sox3P53784 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Sox3P53784 Gm19324-201ENSMUST00000213229 1169 ntBASIC6.58□□□□□ -1.36
Sox3P53784 Gm2089-201ENSMUST00000218294 479 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms