Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm46364-201ENSMUST00000218548 319 ntBASIC10.33□□□□□ -0.76
Cux1P53564 AC119894.1-201ENSMUST00000220399 350 ntBASIC10.33□□□□□ -0.76
Cux1P53564 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Cux1P53564 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cux1P53564 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cux1P53564 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Cux1P53564 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cux1P53564 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Cux1P53564 CT025642.2-201ENSMUST00000225009 1649 ntBASIC10.33□□□□□ -0.76
Cux1P53564 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cux1P53564 Gm42763-201ENSMUST00000199595 2087 ntBASIC10.33□□□□□ -0.76
Cux1P53564 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cux1P53564 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cux1P53564 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cux1P53564 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cux1P53564 Tpx2-202ENSMUST00000109816 3483 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cux1P53564 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cux1P53564 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cux1P53564 Gm45537-201ENSMUST00000211539 2708 ntBASIC10.33□□□□□ -0.76
Cux1P53564 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cux1P53564 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cux1P53564 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cux1P53564 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Cux1P53564 Gm8692-201ENSMUST00000118102 438 ntBASIC10.33□□□□□ -0.76
Cux1P53564 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Cux1P53564 Gm22552-201ENSMUST00000157796 337 ntBASIC10.33□□□□□ -0.76
Cux1P53564 Gm27460-201ENSMUST00000184213 100 ntBASIC10.33□□□□□ -0.76
Cux1P53564 Gm38097-201ENSMUST00000192936 439 ntBASIC10.33□□□□□ -0.76
Cux1P53564 Gm9517-201ENSMUST00000195021 874 ntBASIC10.33□□□□□ -0.76
Cux1P53564 Gm5853-201ENSMUST00000197183 632 ntBASIC10.33□□□□□ -0.76
Cux1P53564 Gm42799-201ENSMUST00000201331 328 ntBASIC10.33□□□□□ -0.76
Cux1P53564 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC10.33□□□□□ -0.76
Cux1P53564 AC135353.1-201ENSMUST00000215330 630 ntBASIC10.33□□□□□ -0.76
Cux1P53564 Gm18112-201ENSMUST00000219862 1195 ntBASIC10.33□□□□□ -0.76
Cux1P53564 CT009515.3-201ENSMUST00000226509 671 ntBASIC10.33□□□□□ -0.76
Cux1P53564 Gm8256-203ENSMUST00000228692 591 ntBASIC10.33□□□□□ -0.76
Cux1P53564 Gm5612-201ENSMUST00000053326 375 ntBASIC10.33□□□□□ -0.76
Cux1P53564 Gm7731-201ENSMUST00000091759 470 ntBASIC10.33□□□□□ -0.76
Cux1P53564 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
Cux1P53564 Myt1-203ENSMUST00000108757 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cux1P53564 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
Cux1P53564 Med1-201ENSMUST00000018304 5845 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cux1P53564 Gm44553-201ENSMUST00000206316 2037 ntBASIC10.32□□□□□ -0.76
Cux1P53564 Ergic2-208ENSMUST00000136008 4174 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cux1P53564 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Cux1P53564 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cux1P53564 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cux1P53564 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC10.32□□□□□ -0.76
Cux1P53564 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC10.32□□□□□ -0.76
Cux1P53564 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cux1P53564 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cux1P53564 Ccdc14-201ENSMUST00000023532 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cux1P53564 Gm6494-201ENSMUST00000218604 2298 ntBASIC10.32□□□□□ -0.76
Cux1P53564 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC10.32□□□□□ -0.76
Cux1P53564 Olfr1378-202ENSMUST00000213259 4324 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Cux1P53564 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Cux1P53564 Gm24888-201ENSMUST00000104387 130 ntBASIC10.32□□□□□ -0.76
Cux1P53564 Gm25782-201ENSMUST00000122526 289 ntBASIC10.32□□□□□ -0.76
Cux1P53564 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cux1P53564 Gm16164-201ENSMUST00000160078 468 ntBASIC10.32□□□□□ -0.76
Cux1P53564 Gm7952-201ENSMUST00000180540 984 ntBASIC10.32□□□□□ -0.76
Cux1P53564 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC10.32□□□□□ -0.76
Cux1P53564 Ighv1-44-201ENSMUST00000195597 352 ntBASIC10.32□□□□□ -0.76
Cux1P53564 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC10.32□□□□□ -0.76
Cux1P53564 Gm3321-201ENSMUST00000200603 1129 ntBASIC10.32□□□□□ -0.76
Cux1P53564 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
Cux1P53564 AC168062.1-201ENSMUST00000228048 769 ntBASIC10.32□□□□□ -0.76
Cux1P53564 AC166574.7-201ENSMUST00000228502 704 ntBASIC10.32□□□□□ -0.76
Cux1P53564 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cux1P53564 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cux1P53564 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Cux1P53564 Acaca-201ENSMUST00000020843 9026 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cux1P53564 Cntrl-212ENSMUST00000156933 7189 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Cux1P53564 Vmn1r51-204ENSMUST00000226977 4357 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Cux1P53564 Fam160a2-208ENSMUST00000179474 10853 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cux1P53564 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cux1P53564 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cux1P53564 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Cux1P53564 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cux1P53564 Abcc12-201ENSMUST00000080115 4511 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cux1P53564 Pogz-205ENSMUST00000107270 6399 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cux1P53564 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cux1P53564 Gm14695-201ENSMUST00000121721 282 ntBASIC10.31□□□□□ -0.76
Cux1P53564 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC10.31□□□□□ -0.76
Cux1P53564 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cux1P53564 Gm24395-201ENSMUST00000158139 125 ntBASIC10.31□□□□□ -0.76
Cux1P53564 Gm25374-201ENSMUST00000158158 101 ntBASIC10.31□□□□□ -0.76
Cux1P53564 Gm25244-201ENSMUST00000178089 132 ntBASIC10.31□□□□□ -0.76
Cux1P53564 Mir3473e-201ENSMUST00000183932 110 ntBASIC10.31□□□□□ -0.76
Cux1P53564 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC10.31□□□□□ -0.76
Cux1P53564 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC10.31□□□□□ -0.76
Cux1P53564 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC10.31□□□□□ -0.76
Cux1P53564 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC10.31□□□□□ -0.76
Cux1P53564 Gm29357-201ENSMUST00000186877 698 ntBASIC10.31□□□□□ -0.76
Cux1P53564 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC10.31□□□□□ -0.76
Cux1P53564 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC10.31□□□□□ -0.76
Cux1P53564 Gm37463-201ENSMUST00000193819 796 ntBASIC10.31□□□□□ -0.76
Cux1P53564 Gm36448-201ENSMUST00000199916 438 ntBASIC10.31□□□□□ -0.76
Cux1P53564 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC10.31□□□□□ -0.76
Cux1P53564 AC117769.2-201ENSMUST00000224612 469 ntBASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms