Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Gm38366-201ENSMUST00000193127 1934 ntBASIC6.2□□□□□ -1.42
Hoxc5P32043 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxc5P32043 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxc5P32043 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxc5P32043 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxc5P32043 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.2□□□□□ -1.42
Hoxc5P32043 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxc5P32043 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxc5P32043 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Hoxc5P32043 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxc5P32043 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxc5P32043 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxc5P32043 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Hoxc5P32043 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxc5P32043 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxc5P32043 Gm18310-201ENSMUST00000206494 3912 ntBASIC6.19□□□□□ -1.42
Hoxc5P32043 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Hoxc5P32043 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Hoxc5P32043 Gm37023-201ENSMUST00000192895 2426 ntBASIC6.19□□□□□ -1.42
Hoxc5P32043 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Hoxc5P32043 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC6.19□□□□□ -1.42
Hoxc5P32043 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxc5P32043 Gm42989-201ENSMUST00000200646 2306 ntBASIC6.19□□□□□ -1.42
Hoxc5P32043 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxc5P32043 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxc5P32043 Mir708-201ENSMUST00000102189 109 ntBASIC6.19□□□□□ -1.42
Hoxc5P32043 Gm25311-201ENSMUST00000104136 132 ntBASIC6.19□□□□□ -1.42
Hoxc5P32043 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Hoxc5P32043 Gm14865-201ENSMUST00000117523 494 ntBASIC6.19□□□□□ -1.42
Hoxc5P32043 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC6.19□□□□□ -1.42
Hoxc5P32043 Gm11726-201ENSMUST00000121028 424 ntBASIC6.19□□□□□ -1.42
Hoxc5P32043 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxc5P32043 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC6.19□□□□□ -1.42
Hoxc5P32043 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxc5P32043 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Hoxc5P32043 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxc5P32043 Gm6061-201ENSMUST00000175860 492 ntBASIC6.19□□□□□ -1.42
Hoxc5P32043 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Hoxc5P32043 Gm27014-201ENSMUST00000182658 937 ntBASIC6.19□□□□□ -1.42
Hoxc5P32043 Gm27178-201ENSMUST00000184962 340 ntBASIC6.19□□□□□ -1.42
Hoxc5P32043 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxc5P32043 Gm3841-201ENSMUST00000191399 451 ntBASIC6.19□□□□□ -1.42
Hoxc5P32043 Gm7412-201ENSMUST00000191692 605 ntBASIC6.19□□□□□ -1.42
Hoxc5P32043 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC6.19□□□□□ -1.42
Hoxc5P32043 Gm21054-201ENSMUST00000203981 380 ntBASIC6.19□□□□□ -1.42
Hoxc5P32043 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxc5P32043 AC132833.4-201ENSMUST00000228313 203 ntBASIC6.19□□□□□ -1.42
Hoxc5P32043 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxc5P32043 Gm18908-201ENSMUST00000207125 1483 ntBASIC6.19□□□□□ -1.42
Hoxc5P32043 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxc5P32043 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Hoxc5P32043 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxc5P32043 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxc5P32043 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Hoxc5P32043 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxc5P32043 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC6.19□□□□□ -1.42
Hoxc5P32043 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Hoxc5P32043 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxc5P32043 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Hoxc5P32043 Gm44441-201ENSMUST00000203642 2475 ntBASIC6.19□□□□□ -1.42
Hoxc5P32043 Gm18451-201ENSMUST00000196759 1719 ntBASIC6.19□□□□□ -1.42
Hoxc5P32043 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxc5P32043 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC6.19□□□□□ -1.42
Hoxc5P32043 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC6.18□□□□□ -1.42
Hoxc5P32043 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Hoxc5P32043 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.18□□□□□ -1.42
Hoxc5P32043 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
Hoxc5P32043 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxc5P32043 Gm20749-201ENSMUST00000186319 3492 ntBASIC6.18□□□□□ -1.42
Hoxc5P32043 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC6.18□□□□□ -1.42
Hoxc5P32043 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxc5P32043 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC6.18□□□□□ -1.42
Hoxc5P32043 Gm43789-201ENSMUST00000199275 2472 ntBASIC6.18□□□□□ -1.42
Hoxc5P32043 CT009480.2-201ENSMUST00000225152 3369 ntBASIC6.18□□□□□ -1.42
Hoxc5P32043 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC6.18□□□□□ -1.42
Hoxc5P32043 Mir678-201ENSMUST00000102114 84 ntBASIC6.18□□□□□ -1.42
Hoxc5P32043 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC6.18□□□□□ -1.42
Hoxc5P32043 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC6.18□□□□□ -1.42
Hoxc5P32043 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Hoxc5P32043 Gm15242-201ENSMUST00000122459 283 ntBASIC6.18□□□□□ -1.42
Hoxc5P32043 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxc5P32043 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC6.18□□□□□ -1.42
Hoxc5P32043 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxc5P32043 Mir5100-201ENSMUST00000174993 64 ntBASIC6.18□□□□□ -1.42
Hoxc5P32043 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxc5P32043 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC6.18□□□□□ -1.42
Hoxc5P32043 Gm28117-201ENSMUST00000188472 371 ntBASIC6.18□□□□□ -1.42
Hoxc5P32043 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC6.18□□□□□ -1.42
Hoxc5P32043 Gm37383-201ENSMUST00000191750 745 ntBASIC6.18□□□□□ -1.42
Hoxc5P32043 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC6.18□□□□□ -1.42
Hoxc5P32043 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC6.18□□□□□ -1.42
Hoxc5P32043 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC6.18□□□□□ -1.42
Hoxc5P32043 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC6.18□□□□□ -1.42
Hoxc5P32043 Gm4525-201ENSMUST00000198831 254 ntBASIC6.18□□□□□ -1.42
Hoxc5P32043 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC6.18□□□□□ -1.42
Hoxc5P32043 Gm2975-201ENSMUST00000209710 820 ntBASIC6.18□□□□□ -1.42
Hoxc5P32043 Gm18781-201ENSMUST00000211252 924 ntBASIC6.18□□□□□ -1.42
Hoxc5P32043 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC6.18□□□□□ -1.42
Hoxc5P32043 Gm19056-201ENSMUST00000218220 797 ntBASIC6.18□□□□□ -1.42
Hoxc5P32043 CT009711.2-202ENSMUST00000224538 973 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms