Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sdc1P18828 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sdc1P18828 Tmem35b-202ENSMUST00000106097 1762 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
Sdc1P18828 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sdc1P18828 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC5.42□□□□□ -1.54
Sdc1P18828 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sdc1P18828 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Sdc1P18828 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Sdc1P18828 Gm26079-201ENSMUST00000104066 133 ntBASIC5.42□□□□□ -1.54
Sdc1P18828 Mir290a-201ENSMUST00000104627 83 ntBASIC5.42□□□□□ -1.54
Sdc1P18828 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
Sdc1P18828 Gabarap-202ENSMUST00000108592 750 ntTSL 3 BASIC5.42□□□□□ -1.54
Sdc1P18828 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Sdc1P18828 Gm11810-201ENSMUST00000118311 333 ntBASIC5.42□□□□□ -1.54
Sdc1P18828 Gm12026-201ENSMUST00000120961 1024 ntBASIC5.42□□□□□ -1.54
Sdc1P18828 Gm14587-201ENSMUST00000121714 658 ntBASIC5.42□□□□□ -1.54
Sdc1P18828 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC5.42□□□□□ -1.54
Sdc1P18828 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Sdc1P18828 Gm24228-201ENSMUST00000158829 129 ntBASIC5.42□□□□□ -1.54
Sdc1P18828 Gm17129-201ENSMUST00000168168 505 ntBASIC5.42□□□□□ -1.54
Sdc1P18828 Gm6726-201ENSMUST00000172786 681 ntBASIC5.42□□□□□ -1.54
Sdc1P18828 Gm18552-201ENSMUST00000187425 538 ntBASIC5.42□□□□□ -1.54
Sdc1P18828 Gm37929-201ENSMUST00000195116 493 ntBASIC5.42□□□□□ -1.54
Sdc1P18828 Gm8920-201ENSMUST00000196153 924 ntBASIC5.42□□□□□ -1.54
Sdc1P18828 Igkv8-34-201ENSMUST00000196959 365 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Sdc1P18828 Gm8925-201ENSMUST00000197212 763 ntBASIC5.42□□□□□ -1.54
Sdc1P18828 Gm43013-201ENSMUST00000198216 247 ntBASIC5.42□□□□□ -1.54
Sdc1P18828 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Sdc1P18828 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC5.42□□□□□ -1.54
Sdc1P18828 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC5.42□□□□□ -1.54
Sdc1P18828 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.42□□□□□ -1.54
Sdc1P18828 AC151971.2-201ENSMUST00000217540 909 ntBASIC5.42□□□□□ -1.54
Sdc1P18828 AC132384.8-201ENSMUST00000218152 1204 ntBASIC5.42□□□□□ -1.54
Sdc1P18828 AC102312.1-202ENSMUST00000218600 851 ntTSL 2 BASIC5.42□□□□□ -1.54
Sdc1P18828 AC134537.1-201ENSMUST00000219205 265 ntBASIC5.42□□□□□ -1.54
Sdc1P18828 AC163631.1-201ENSMUST00000225041 598 ntBASIC5.42□□□□□ -1.54
Sdc1P18828 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Sdc1P18828 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Sdc1P18828 Gm43588-201ENSMUST00000201862 2298 ntBASIC5.42□□□□□ -1.54
Sdc1P18828 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sdc1P18828 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC5.42□□□□□ -1.54
Sdc1P18828 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sdc1P18828 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Sdc1P18828 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC5.42□□□□□ -1.54
Sdc1P18828 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC5.42□□□□□ -1.54
Sdc1P18828 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sdc1P18828 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sdc1P18828 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sdc1P18828 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
Sdc1P18828 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Sdc1P18828 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sdc1P18828 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC5.42□□□□□ -1.54
Sdc1P18828 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sdc1P18828 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.42□□□□□ -1.54
Sdc1P18828 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Sdc1P18828 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sdc1P18828 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sdc1P18828 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Sdc1P18828 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sdc1P18828 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sdc1P18828 Gm37079-201ENSMUST00000194114 2135 ntBASIC5.41□□□□□ -1.54
Sdc1P18828 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Sdc1P18828 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Sdc1P18828 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sdc1P18828 Gm24462-201ENSMUST00000102430 106 ntBASIC5.41□□□□□ -1.54
Sdc1P18828 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Sdc1P18828 Hist1h4f-201ENSMUST00000102971 391 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Sdc1P18828 Ighv1-22-201ENSMUST00000103507 351 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Sdc1P18828 Tsacc-201ENSMUST00000010682 481 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sdc1P18828 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Sdc1P18828 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Sdc1P18828 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Sdc1P18828 Gm12677-201ENSMUST00000118668 426 ntBASIC5.41□□□□□ -1.54
Sdc1P18828 Gm14300-201ENSMUST00000120800 946 ntBASIC5.41□□□□□ -1.54
Sdc1P18828 Gm24139-201ENSMUST00000122780 288 ntBASIC5.41□□□□□ -1.54
Sdc1P18828 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Sdc1P18828 Gm13536-201ENSMUST00000132913 766 ntTSL 2 BASIC5.41□□□□□ -1.54
Sdc1P18828 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Sdc1P18828 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC5.41□□□□□ -1.54
Sdc1P18828 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC5.41□□□□□ -1.54
Sdc1P18828 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC5.41□□□□□ -1.54
Sdc1P18828 Gm16556-201ENSMUST00000162608 471 ntTSL 5 BASIC5.41□□□□□ -1.54
Sdc1P18828 Vmn2r-ps7-201ENSMUST00000176244 1098 ntBASIC5.41□□□□□ -1.54
Sdc1P18828 n-R5s109-201ENSMUST00000179195 119 ntBASIC5.41□□□□□ -1.54
Sdc1P18828 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC5.41□□□□□ -1.54
Sdc1P18828 5031425E22Rik-205ENSMUST00000191186 719 ntTSL 3 BASIC5.41□□□□□ -1.54
Sdc1P18828 Ighv1-33-201ENSMUST00000193220 350 ntBASIC5.41□□□□□ -1.54
Sdc1P18828 Gm5851-201ENSMUST00000194132 1204 ntBASIC5.41□□□□□ -1.54
Sdc1P18828 Gm44725-201ENSMUST00000205307 391 ntTSL 5 BASIC5.41□□□□□ -1.54
Sdc1P18828 Gm45475-201ENSMUST00000209381 309 ntBASIC5.41□□□□□ -1.54
Sdc1P18828 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC5.41□□□□□ -1.54
Sdc1P18828 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Sdc1P18828 AC129219.1-201ENSMUST00000224336 448 ntBASIC5.41□□□□□ -1.54
Sdc1P18828 AC123867.1-201ENSMUST00000224990 816 ntBASIC5.41□□□□□ -1.54
Sdc1P18828 AV026068-229ENSMUST00000225516 595 ntBASIC5.41□□□□□ -1.54
Sdc1P18828 CT030732.1-201ENSMUST00000226885 246 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Sdc1P18828 AC116319.2-201ENSMUST00000228159 984 ntBASIC5.41□□□□□ -1.54
Sdc1P18828 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sdc1P18828 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sdc1P18828 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 159.3 ms