Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Gm22284-201ENSMUST00000104132 132 ntBASIC6.96□□□□□ -1.3
Hoxa9P09631 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Hoxa9P09631 Gm7494-201ENSMUST00000121248 441 ntBASIC6.96□□□□□ -1.3
Hoxa9P09631 Gm11472-201ENSMUST00000121305 556 ntBASIC6.96□□□□□ -1.3
Hoxa9P09631 Gm12451-201ENSMUST00000121636 633 ntBASIC6.96□□□□□ -1.3
Hoxa9P09631 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Hoxa9P09631 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Hoxa9P09631 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Hoxa9P09631 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Hoxa9P09631 Gm20530-201ENSMUST00000174261 254 ntBASIC6.96□□□□□ -1.3
Hoxa9P09631 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC6.96□□□□□ -1.3
Hoxa9P09631 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Hoxa9P09631 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC6.96□□□□□ -1.3
Hoxa9P09631 Gm21877-201ENSMUST00000185640 694 ntBASIC6.96□□□□□ -1.3
Hoxa9P09631 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC6.96□□□□□ -1.3
Hoxa9P09631 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Hoxa9P09631 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC6.96□□□□□ -1.3
Hoxa9P09631 Gm37189-201ENSMUST00000192131 298 ntBASIC6.96□□□□□ -1.3
Hoxa9P09631 Gm38068-201ENSMUST00000192546 540 ntBASIC6.96□□□□□ -1.3
Hoxa9P09631 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
Hoxa9P09631 Gm43459-201ENSMUST00000202093 331 ntBASIC6.96□□□□□ -1.3
Hoxa9P09631 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Hoxa9P09631 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC6.96□□□□□ -1.3
Hoxa9P09631 AC154558.1-201ENSMUST00000222278 415 ntBASIC6.96□□□□□ -1.3
Hoxa9P09631 Vmn1r41-202ENSMUST00000226337 888 ntBASIC6.96□□□□□ -1.3
Hoxa9P09631 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC6.96□□□□□ -1.3
Hoxa9P09631 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Hoxa9P09631 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Hoxa9P09631 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC6.96□□□□□ -1.3
Hoxa9P09631 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC6.96□□□□□ -1.3
Hoxa9P09631 Gm42653-201ENSMUST00000200644 2839 ntBASIC6.96□□□□□ -1.3
Hoxa9P09631 Gm37530-201ENSMUST00000191759 4932 ntBASIC6.96□□□□□ -1.3
Hoxa9P09631 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Hoxa9P09631 Gm45001-201ENSMUST00000208279 2515 ntBASIC6.96□□□□□ -1.3
Hoxa9P09631 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
Hoxa9P09631 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Hoxa9P09631 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Hoxa9P09631 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
Hoxa9P09631 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Hoxa9P09631 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Hoxa9P09631 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Hoxa9P09631 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC6.96□□□□□ -1.3
Hoxa9P09631 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Hoxa9P09631 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Hoxa9P09631 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxa9P09631 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxa9P09631 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxa9P09631 AC139758.3-201ENSMUST00000226853 2704 ntBASIC6.95□□□□□ -1.3
Hoxa9P09631 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxa9P09631 Gm44863-201ENSMUST00000207613 1422 ntBASIC6.95□□□□□ -1.3
Hoxa9P09631 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxa9P09631 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC6.95□□□□□ -1.3
Hoxa9P09631 Gm45250-201ENSMUST00000209414 3592 ntBASIC6.95□□□□□ -1.3
Hoxa9P09631 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxa9P09631 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Hoxa9P09631 Gm9030-201ENSMUST00000218405 2410 ntBASIC6.95□□□□□ -1.3
Hoxa9P09631 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Hoxa9P09631 Gm9029-201ENSMUST00000219232 2410 ntBASIC6.95□□□□□ -1.3
Hoxa9P09631 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Hoxa9P09631 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Hoxa9P09631 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxa9P09631 Gm42577-201ENSMUST00000201367 3211 ntBASIC6.95□□□□□ -1.3
Hoxa9P09631 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxa9P09631 Gm25785-201ENSMUST00000104129 125 ntBASIC6.95□□□□□ -1.3
Hoxa9P09631 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxa9P09631 Gm14864-201ENSMUST00000116164 1087 ntBASIC6.95□□□□□ -1.3
Hoxa9P09631 Gm13006-201ENSMUST00000118683 214 ntBASIC6.95□□□□□ -1.3
Hoxa9P09631 Gm12540-201ENSMUST00000121938 319 ntBASIC6.95□□□□□ -1.3
Hoxa9P09631 Gm25178-201ENSMUST00000122633 325 ntBASIC6.95□□□□□ -1.3
Hoxa9P09631 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxa9P09631 Mir199b-201ENSMUST00000175066 110 ntBASIC6.95□□□□□ -1.3
Hoxa9P09631 Mir6244-201ENSMUST00000184156 117 ntBASIC6.95□□□□□ -1.3
Hoxa9P09631 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Hoxa9P09631 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Hoxa9P09631 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Hoxa9P09631 Gm43089-201ENSMUST00000199162 275 ntBASIC6.95□□□□□ -1.3
Hoxa9P09631 AC153937.1-201ENSMUST00000218734 412 ntBASIC6.95□□□□□ -1.3
Hoxa9P09631 CT009742.1-201ENSMUST00000222507 702 ntBASIC6.95□□□□□ -1.3
Hoxa9P09631 AC125405.2-201ENSMUST00000227862 383 ntBASIC6.95□□□□□ -1.3
Hoxa9P09631 AC135086.1-201ENSMUST00000228621 817 ntBASIC6.95□□□□□ -1.3
Hoxa9P09631 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxa9P09631 AW822073-201ENSMUST00000075305 555 ntBASIC6.95□□□□□ -1.3
Hoxa9P09631 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Hoxa9P09631 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxa9P09631 Gm5702-201ENSMUST00000185629 2469 ntBASIC6.95□□□□□ -1.3
Hoxa9P09631 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxa9P09631 AC111010.1-203ENSMUST00000227287 1548 ntBASIC6.95□□□□□ -1.3
Hoxa9P09631 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxa9P09631 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxa9P09631 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Hoxa9P09631 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxa9P09631 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC6.95□□□□□ -1.3
Hoxa9P09631 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxa9P09631 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Hoxa9P09631 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxa9P09631 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxa9P09631 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxa9P09631 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Hoxa9P09631 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Hoxa9P09631 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms