Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Grhl3-201ENSMUST00000105855 2789 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm29671-201ENSMUST00000189438 2166 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Olfr522-201ENSMUST00000050585 4766 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Hoxd3P09027 Tnfsf15-201ENSMUST00000062246 3347 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Pet2-201ENSMUST00000113959 4183 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Hoxd3P09027 Pet2-202ENSMUST00000113960 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm7389-201ENSMUST00000181162 2884 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Rps6ka6-201ENSMUST00000065976 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Nqo1-201ENSMUST00000003947 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm973-201ENSMUST00000114243 3595 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm44873-201ENSMUST00000208490 3428 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 Vnn1-201ENSMUST00000041416 2416 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Ctdsp2-201ENSMUST00000105255 4136 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm24273-201ENSMUST00000102332 164 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 Ighv1-59-201ENSMUST00000103530 348 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm25502-201ENSMUST00000104428 131 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Hoxd3P09027 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm5915-201ENSMUST00000116136 454 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm11372-201ENSMUST00000117348 570 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm14561-201ENSMUST00000117376 798 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm14794-201ENSMUST00000118181 192 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm15186-201ENSMUST00000119345 563 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm11943-201ENSMUST00000119473 327 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 Vmn1r-ps103-201ENSMUST00000120171 893 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm15791-201ENSMUST00000120365 319 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm11522-201ENSMUST00000120533 176 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm15596-201ENSMUST00000121139 784 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm13593-201ENSMUST00000121329 692 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm13368-201ENSMUST00000122443 430 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm40614-201ENSMUST00000125161 1254 ntTSL 5 BASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm11534-202ENSMUST00000129261 470 ntTSL 3 BASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm25898-201ENSMUST00000158303 106 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm26173-201ENSMUST00000158416 136 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Hoxd3P09027 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
Hoxd3P09027 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Tnfaip8-213ENSMUST00000180305 369 ntTSL 5 BASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm27044-201ENSMUST00000183033 796 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 Ms4a3-202ENSMUST00000186023 966 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 4933400F21Rik-201ENSMUST00000186098 1007 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm29563-201ENSMUST00000187249 496 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm43647-201ENSMUST00000198142 486 ntTSL 5 BASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm43709-201ENSMUST00000199870 559 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm43129-201ENSMUST00000201237 603 ntTSL 3 BASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm43631-201ENSMUST00000202011 369 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm6063-201ENSMUST00000206958 485 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC6.54□□□□□ -1.36
Hoxd3P09027 AC161520.1-201ENSMUST00000210954 939 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm45454-201ENSMUST00000211484 455 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm45834-201ENSMUST00000212445 454 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 AC160338.3-201ENSMUST00000214836 384 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm17875-201ENSMUST00000216005 941 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC6.54□□□□□ -1.36
Hoxd3P09027 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm34278-201ENSMUST00000220534 622 ntTSL 5 BASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm5789-201ENSMUST00000222643 865 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC6.54□□□□□ -1.36
Hoxd3P09027 AC139381.1-201ENSMUST00000224215 478 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 CT030646.1-201ENSMUST00000225049 980 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 AC163646.2-201ENSMUST00000227962 141 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 Ghrh-201ENSMUST00000029172 516 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Tarm1-201ENSMUST00000065703 892 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Ube2e2-201ENSMUST00000076133 606 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Hoxd3P09027 Olfr319-201ENSMUST00000076965 921 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Hoxd3P09027 n-R5s28-201ENSMUST00000082814 119 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 Olfr514-201ENSMUST00000084754 933 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Hoxd3P09027 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm21541-201ENSMUST00000098128 870 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Grm8-201ENSMUST00000090512 2830 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm3455-201ENSMUST00000204812 1954 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Zfp93-202ENSMUST00000108438 3508 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Olfr1221-204ENSMUST00000217635 3753 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Hoxd3P09027 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Hoxd3P09027 Gsdma2-202ENSMUST00000093938 1673 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm42636-201ENSMUST00000197174 2239 ntBASIC6.54□□□□□ -1.36
Hoxd3P09027 Casp14-202ENSMUST00000219237 2200 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Hoxd3P09027 Vmn2r55-202ENSMUST00000172743 2346 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Hoxd3P09027 Map3k20-204ENSMUST00000135469 6663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Zfp180-201ENSMUST00000068975 3901 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Kif9-201ENSMUST00000061155 2956 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Hoxd3P09027 Taf12-201ENSMUST00000030731 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxd3P09027 Ambn-201ENSMUST00000031226 1854 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms