Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a4A2AX52 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a4A2AX52 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a4A2AX52 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col6a4A2AX52 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a4A2AX52 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Col6a4A2AX52 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a4A2AX52 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a4A2AX52 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Col6a4A2AX52 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC5.74□□□□□ -1.49
Col6a4A2AX52 Gm14251-201ENSMUST00000122133 279 ntBASIC5.74□□□□□ -1.49
Col6a4A2AX52 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a4A2AX52 Gm4613-201ENSMUST00000165488 276 ntBASIC5.74□□□□□ -1.49
Col6a4A2AX52 Gm25675-201ENSMUST00000174979 118 ntBASIC5.74□□□□□ -1.49
Col6a4A2AX52 Gm6693-201ENSMUST00000189583 813 ntBASIC5.74□□□□□ -1.49
Col6a4A2AX52 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC5.74□□□□□ -1.49
Col6a4A2AX52 Gm33037-201ENSMUST00000217927 642 ntTSL 3 BASIC5.74□□□□□ -1.49
Col6a4A2AX52 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC5.74□□□□□ -1.49
Col6a4A2AX52 Gm19116-201ENSMUST00000218592 642 ntBASIC5.74□□□□□ -1.49
Col6a4A2AX52 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC5.74□□□□□ -1.49
Col6a4A2AX52 CT009742.1-201ENSMUST00000222507 702 ntBASIC5.74□□□□□ -1.49
Col6a4A2AX52 AC163684.1-201ENSMUST00000223766 927 ntBASIC5.74□□□□□ -1.49
Col6a4A2AX52 AC121997.2-202ENSMUST00000227158 939 ntBASIC5.74□□□□□ -1.49
Col6a4A2AX52 AC138765.3-201ENSMUST00000227981 423 ntBASIC5.74□□□□□ -1.49
Col6a4A2AX52 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a4A2AX52 Gm24451-201ENSMUST00000083353 133 ntBASIC5.74□□□□□ -1.49
Col6a4A2AX52 Gtdc1-201ENSMUST00000049051 2197 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a4A2AX52 Gm13821-201ENSMUST00000202029 3201 ntBASIC5.74□□□□□ -1.49
Col6a4A2AX52 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a4A2AX52 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a4A2AX52 AC117608.1-201ENSMUST00000225500 3418 ntBASIC5.74□□□□□ -1.49
Col6a4A2AX52 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a4A2AX52 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a4A2AX52 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a4A2AX52 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a4A2AX52 AC153959.1-201ENSMUST00000213617 1694 ntBASIC5.74□□□□□ -1.49
Col6a4A2AX52 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC5.74□□□□□ -1.49
Col6a4A2AX52 Esrrg-201ENSMUST00000027906 5293 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a4A2AX52 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a4A2AX52 Dalir-201ENSMUST00000188773 2170 ntBASIC5.74□□□□□ -1.49
Col6a4A2AX52 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Col6a4A2AX52 Gm2762-207ENSMUST00000202739 2665 ntBASIC5.74□□□□□ -1.49
Col6a4A2AX52 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a4A2AX52 Gm22194-201ENSMUST00000116869 95 ntBASIC5.74□□□□□ -1.49
Col6a4A2AX52 Gm15209-201ENSMUST00000117703 400 ntBASIC5.74□□□□□ -1.49
Col6a4A2AX52 Gm9428-201ENSMUST00000127214 769 ntBASIC5.74□□□□□ -1.49
Col6a4A2AX52 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC5.74□□□□□ -1.49
Col6a4A2AX52 Mir7674-201ENSMUST00000184964 63 ntBASIC5.74□□□□□ -1.49
Col6a4A2AX52 Gm18447-201ENSMUST00000187501 307 ntBASIC5.74□□□□□ -1.49
Col6a4A2AX52 Gm28266-201ENSMUST00000191410 439 ntBASIC5.74□□□□□ -1.49
Col6a4A2AX52 Gm38022-201ENSMUST00000191762 403 ntBASIC5.74□□□□□ -1.49
Col6a4A2AX52 Gm43383-201ENSMUST00000195981 469 ntBASIC5.74□□□□□ -1.49
Col6a4A2AX52 AC126554.3-201ENSMUST00000223131 493 ntBASIC5.74□□□□□ -1.49
Col6a4A2AX52 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col6a4A2AX52 AC139750.1-201ENSMUST00000223962 1300 ntBASIC5.74□□□□□ -1.49
Col6a4A2AX52 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC5.74□□□□□ -1.49
Col6a4A2AX52 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Gm15616-201ENSMUST00000118662 375 ntBASIC5.73□□□□□ -1.49
Col6a4A2AX52 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC5.73□□□□□ -1.49
Col6a4A2AX52 Gm8582-201ENSMUST00000164061 789 ntBASIC5.73□□□□□ -1.49
Col6a4A2AX52 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Mir3078-201ENSMUST00000175231 87 ntBASIC5.73□□□□□ -1.49
Col6a4A2AX52 Zfp572-202ENSMUST00000184208 1078 ntBASIC5.73□□□□□ -1.49
Col6a4A2AX52 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Gm35323-201ENSMUST00000191836 499 ntBASIC5.73□□□□□ -1.49
Col6a4A2AX52 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC5.73□□□□□ -1.49
Col6a4A2AX52 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Gm6558-203ENSMUST00000195395 612 ntTSL 5 BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Gm6077-201ENSMUST00000196008 499 ntBASIC5.73□□□□□ -1.49
Col6a4A2AX52 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Gm26442-201ENSMUST00000082588 153 ntBASIC5.73□□□□□ -1.49
Col6a4A2AX52 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a4A2AX52 6330549D23Rik-203ENSMUST00000160818 3228 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC5.73□□□□□ -1.49
Col6a4A2AX52 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC5.73□□□□□ -1.49
Col6a4A2AX52 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a4A2AX52 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Olfr958-202ENSMUST00000215505 3514 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Cep135-201ENSMUST00000049060 5313 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Gm9839-201ENSMUST00000195252 1437 ntBASIC5.73□□□□□ -1.49
Col6a4A2AX52 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col6a4A2AX52 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 120.4 ms