Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
H2afb2S4R1M3 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
H2afb2S4R1M3 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
H2afb2S4R1M3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.26■□□□□ 0.51
H2afb2S4R1M3 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
H2afb2S4R1M3 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
H2afb2S4R1M3 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
H2afb2S4R1M3 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
H2afb2S4R1M3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
H2afb2S4R1M3 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
H2afb2S4R1M3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
H2afb2S4R1M3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
H2afb2S4R1M3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.25■□□□□ 0.51
H2afb2S4R1M3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.25■□□□□ 0.51
H2afb2S4R1M3 Gm6365-201ENSMUST00000054711 744 ntBASIC18.25■□□□□ 0.51
H2afb2S4R1M3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
H2afb2S4R1M3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
H2afb2S4R1M3 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
H2afb2S4R1M3 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
H2afb2S4R1M3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
H2afb2S4R1M3 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
H2afb2S4R1M3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
H2afb2S4R1M3 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
H2afb2S4R1M3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
H2afb2S4R1M3 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
H2afb2S4R1M3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
H2afb2S4R1M3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
H2afb2S4R1M3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
H2afb2S4R1M3 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
H2afb2S4R1M3 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
H2afb2S4R1M3 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
H2afb2S4R1M3 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
H2afb2S4R1M3 Gm22325-201ENSMUST00000158904 308 ntBASIC18.24■□□□□ 0.51
H2afb2S4R1M3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.24■□□□□ 0.51
H2afb2S4R1M3 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.24■□□□□ 0.51
H2afb2S4R1M3 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
H2afb2S4R1M3 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
H2afb2S4R1M3 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
H2afb2S4R1M3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
H2afb2S4R1M3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
H2afb2S4R1M3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
H2afb2S4R1M3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
H2afb2S4R1M3 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
H2afb2S4R1M3 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
H2afb2S4R1M3 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
H2afb2S4R1M3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
H2afb2S4R1M3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.23■□□□□ 0.51
H2afb2S4R1M3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.23■□□□□ 0.51
H2afb2S4R1M3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
H2afb2S4R1M3 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
H2afb2S4R1M3 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
H2afb2S4R1M3 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
H2afb2S4R1M3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
H2afb2S4R1M3 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.23■□□□□ 0.51
H2afb2S4R1M3 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
H2afb2S4R1M3 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
H2afb2S4R1M3 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.22■□□□□ 0.51
H2afb2S4R1M3 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
H2afb2S4R1M3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
H2afb2S4R1M3 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
H2afb2S4R1M3 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
H2afb2S4R1M3 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
H2afb2S4R1M3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.22■□□□□ 0.51
H2afb2S4R1M3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
H2afb2S4R1M3 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
H2afb2S4R1M3 Gm15039-201ENSMUST00000118914 875 ntBASIC18.22■□□□□ 0.51
H2afb2S4R1M3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.22■□□□□ 0.51
H2afb2S4R1M3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
H2afb2S4R1M3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
H2afb2S4R1M3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
H2afb2S4R1M3 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
H2afb2S4R1M3 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.22■□□□□ 0.51
H2afb2S4R1M3 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.22■□□□□ 0.51
H2afb2S4R1M3 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
H2afb2S4R1M3 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
H2afb2S4R1M3 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
H2afb2S4R1M3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
H2afb2S4R1M3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
H2afb2S4R1M3 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.21■□□□□ 0.51
H2afb2S4R1M3 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.21■□□□□ 0.51
H2afb2S4R1M3 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
H2afb2S4R1M3 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
H2afb2S4R1M3 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
H2afb2S4R1M3 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
H2afb2S4R1M3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
H2afb2S4R1M3 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
H2afb2S4R1M3 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.21■□□□□ 0.51
H2afb2S4R1M3 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
H2afb2S4R1M3 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.21■□□□□ 0.51
H2afb2S4R1M3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
H2afb2S4R1M3 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
H2afb2S4R1M3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
H2afb2S4R1M3 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
H2afb2S4R1M3 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
H2afb2S4R1M3 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
H2afb2S4R1M3 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
H2afb2S4R1M3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
H2afb2S4R1M3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
H2afb2S4R1M3 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
H2afb2S4R1M3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms