Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb3S4R1G7 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.42■□□□□ 0.22
H2afb3S4R1G7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.42■□□□□ 0.22
H2afb3S4R1G7 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb3S4R1G7 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.42■□□□□ 0.22
H2afb3S4R1G7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb3S4R1G7 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
H2afb3S4R1G7 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb3S4R1G7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb3S4R1G7 Grk6-206ENSMUST00000224995 2971 ntBASIC16.42■□□□□ 0.22
H2afb3S4R1G7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
H2afb3S4R1G7 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
H2afb3S4R1G7 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
H2afb3S4R1G7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb3S4R1G7 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2afb3S4R1G7 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb3S4R1G7 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.41■□□□□ 0.22
H2afb3S4R1G7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb3S4R1G7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb3S4R1G7 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
H2afb3S4R1G7 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb3S4R1G7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
H2afb3S4R1G7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.41■□□□□ 0.22
H2afb3S4R1G7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
H2afb3S4R1G7 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb3S4R1G7 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
H2afb3S4R1G7 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.41■□□□□ 0.22
H2afb3S4R1G7 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb3S4R1G7 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb3S4R1G7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb3S4R1G7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb3S4R1G7 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb3S4R1G7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb3S4R1G7 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb3S4R1G7 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb3S4R1G7 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb3S4R1G7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
H2afb3S4R1G7 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.41■□□□□ 0.22
H2afb3S4R1G7 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb3S4R1G7 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb3S4R1G7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb3S4R1G7 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb3S4R1G7 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.4■□□□□ 0.22
H2afb3S4R1G7 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb3S4R1G7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
H2afb3S4R1G7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.4■□□□□ 0.22
H2afb3S4R1G7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb3S4R1G7 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb3S4R1G7 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
H2afb3S4R1G7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb3S4R1G7 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.4■□□□□ 0.22
H2afb3S4R1G7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
H2afb3S4R1G7 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
H2afb3S4R1G7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.4■□□□□ 0.22
H2afb3S4R1G7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
H2afb3S4R1G7 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.4■□□□□ 0.22
H2afb3S4R1G7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb3S4R1G7 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
H2afb3S4R1G7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb3S4R1G7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb3S4R1G7 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb3S4R1G7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
H2afb3S4R1G7 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
H2afb3S4R1G7 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb3S4R1G7 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb3S4R1G7 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb3S4R1G7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb3S4R1G7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb3S4R1G7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb3S4R1G7 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.39■□□□□ 0.21
H2afb3S4R1G7 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb3S4R1G7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.39■□□□□ 0.21
H2afb3S4R1G7 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.39■□□□□ 0.21
H2afb3S4R1G7 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
H2afb3S4R1G7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb3S4R1G7 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb3S4R1G7 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb3S4R1G7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb3S4R1G7 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb3S4R1G7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb3S4R1G7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb3S4R1G7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb3S4R1G7 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb3S4R1G7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb3S4R1G7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
H2afb3S4R1G7 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H2afb3S4R1G7 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H2afb3S4R1G7 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
H2afb3S4R1G7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
H2afb3S4R1G7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.38■□□□□ 0.21
H2afb3S4R1G7 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
H2afb3S4R1G7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
H2afb3S4R1G7 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
H2afb3S4R1G7 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
H2afb3S4R1G7 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H2afb3S4R1G7 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
H2afb3S4R1G7 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
H2afb3S4R1G7 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H2afb3S4R1G7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.37■□□□□ 0.21
H2afb3S4R1G7 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms