Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Mrpl40Q9Z2Q5 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mrpl40Q9Z2Q5 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Mrpl40Q9Z2Q5 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Mrpl40Q9Z2Q5 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mrpl40Q9Z2Q5 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mrpl40Q9Z2Q5 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mrpl40Q9Z2Q5 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mrpl40Q9Z2Q5 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.2■□□□□ 0.5
Mrpl40Q9Z2Q5 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mrpl40Q9Z2Q5 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mrpl40Q9Z2Q5 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.2■□□□□ 0.5
Mrpl40Q9Z2Q5 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.2■□□□□ 0.5
Mrpl40Q9Z2Q5 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.2■□□□□ 0.5
Mrpl40Q9Z2Q5 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mrpl40Q9Z2Q5 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mrpl40Q9Z2Q5 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mrpl40Q9Z2Q5 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mrpl40Q9Z2Q5 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mrpl40Q9Z2Q5 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Mrpl40Q9Z2Q5 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mrpl40Q9Z2Q5 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Mrpl40Q9Z2Q5 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mrpl40Q9Z2Q5 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mrpl40Q9Z2Q5 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Mrpl40Q9Z2Q5 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.19■□□□□ 0.5
Mrpl40Q9Z2Q5 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mrpl40Q9Z2Q5 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mrpl40Q9Z2Q5 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.19■□□□□ 0.5
Mrpl40Q9Z2Q5 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.19■□□□□ 0.5
Mrpl40Q9Z2Q5 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.19■□□□□ 0.5
Mrpl40Q9Z2Q5 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Mrpl40Q9Z2Q5 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mrpl40Q9Z2Q5 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mrpl40Q9Z2Q5 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mrpl40Q9Z2Q5 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Mrpl40Q9Z2Q5 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.18■□□□□ 0.5
Mrpl40Q9Z2Q5 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mrpl40Q9Z2Q5 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mrpl40Q9Z2Q5 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Mrpl40Q9Z2Q5 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mrpl40Q9Z2Q5 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mrpl40Q9Z2Q5 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Mrpl40Q9Z2Q5 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Mrpl40Q9Z2Q5 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mrpl40Q9Z2Q5 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Mrpl40Q9Z2Q5 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mrpl40Q9Z2Q5 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Mrpl40Q9Z2Q5 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.18■□□□□ 0.5
Mrpl40Q9Z2Q5 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mrpl40Q9Z2Q5 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.18■□□□□ 0.5
Mrpl40Q9Z2Q5 Gm20049-201ENSMUST00000219950 730 ntBASIC18.18■□□□□ 0.5
Mrpl40Q9Z2Q5 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mrpl40Q9Z2Q5 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Mrpl40Q9Z2Q5 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mrpl40Q9Z2Q5 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mrpl40Q9Z2Q5 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mrpl40Q9Z2Q5 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
Mrpl40Q9Z2Q5 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Mrpl40Q9Z2Q5 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mrpl40Q9Z2Q5 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Mrpl40Q9Z2Q5 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mrpl40Q9Z2Q5 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mrpl40Q9Z2Q5 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mrpl40Q9Z2Q5 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mrpl40Q9Z2Q5 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.17■□□□□ 0.5
Mrpl40Q9Z2Q5 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.17■□□□□ 0.5
Mrpl40Q9Z2Q5 Gm8520-201ENSMUST00000186517 868 ntBASIC18.17■□□□□ 0.5
Mrpl40Q9Z2Q5 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.17■□□□□ 0.5
Mrpl40Q9Z2Q5 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mrpl40Q9Z2Q5 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mrpl40Q9Z2Q5 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mrpl40Q9Z2Q5 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mrpl40Q9Z2Q5 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.17■□□□□ 0.5
Mrpl40Q9Z2Q5 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Mrpl40Q9Z2Q5 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.16■□□□□ 0.5
Mrpl40Q9Z2Q5 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mrpl40Q9Z2Q5 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Mrpl40Q9Z2Q5 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mrpl40Q9Z2Q5 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.16■□□□□ 0.5
Mrpl40Q9Z2Q5 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mrpl40Q9Z2Q5 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.16■□□□□ 0.5
Mrpl40Q9Z2Q5 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mrpl40Q9Z2Q5 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mrpl40Q9Z2Q5 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Mrpl40Q9Z2Q5 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Mrpl40Q9Z2Q5 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.16■□□□□ 0.5
Mrpl40Q9Z2Q5 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Mrpl40Q9Z2Q5 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Mrpl40Q9Z2Q5 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mrpl40Q9Z2Q5 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mrpl40Q9Z2Q5 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.15■□□□□ 0.5
Mrpl40Q9Z2Q5 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Mrpl40Q9Z2Q5 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mrpl40Q9Z2Q5 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Mrpl40Q9Z2Q5 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mrpl40Q9Z2Q5 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.15■□□□□ 0.5
Mrpl40Q9Z2Q5 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Mrpl40Q9Z2Q5 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Mrpl40Q9Z2Q5 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms