Protein–RNA interactions for Protein: Q9R0P9

Uchl1, Ubiquitin carboxyl-terminal hydrolase isozyme L1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uchl1Q9R0P9 Gm9959-201ENSMUST00000068277 390 ntBASIC16.15■□□□□ 0.18
Uchl1Q9R0P9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Uchl1Q9R0P9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Uchl1Q9R0P9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Uchl1Q9R0P9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Uchl1Q9R0P9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Uchl1Q9R0P9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Uchl1Q9R0P9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Uchl1Q9R0P9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Uchl1Q9R0P9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.14■□□□□ 0.17
Uchl1Q9R0P9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.14■□□□□ 0.17
Uchl1Q9R0P9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Uchl1Q9R0P9 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Uchl1Q9R0P9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Uchl1Q9R0P9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Uchl1Q9R0P9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Uchl1Q9R0P9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Uchl1Q9R0P9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.14■□□□□ 0.17
Uchl1Q9R0P9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Uchl1Q9R0P9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Uchl1Q9R0P9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Uchl1Q9R0P9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Uchl1Q9R0P9 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.14■□□□□ 0.17
Uchl1Q9R0P9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Uchl1Q9R0P9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.13■□□□□ 0.17
Uchl1Q9R0P9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Uchl1Q9R0P9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uchl1Q9R0P9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uchl1Q9R0P9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.13■□□□□ 0.17
Uchl1Q9R0P9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uchl1Q9R0P9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uchl1Q9R0P9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.13■□□□□ 0.17
Uchl1Q9R0P9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uchl1Q9R0P9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uchl1Q9R0P9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uchl1Q9R0P9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uchl1Q9R0P9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Uchl1Q9R0P9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Uchl1Q9R0P9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Uchl1Q9R0P9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Uchl1Q9R0P9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Uchl1Q9R0P9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Uchl1Q9R0P9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Uchl1Q9R0P9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Uchl1Q9R0P9 Golgb1-201ENSMUST00000023534 498 ntBASIC16.12■□□□□ 0.17
Uchl1Q9R0P9 Gm5812-201ENSMUST00000061073 957 ntBASIC16.12■□□□□ 0.17
Uchl1Q9R0P9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Uchl1Q9R0P9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Uchl1Q9R0P9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.12■□□□□ 0.17
Uchl1Q9R0P9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Uchl1Q9R0P9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Uchl1Q9R0P9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Uchl1Q9R0P9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Uchl1Q9R0P9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.12■□□□□ 0.17
Uchl1Q9R0P9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Uchl1Q9R0P9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Uchl1Q9R0P9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Uchl1Q9R0P9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Uchl1Q9R0P9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Uchl1Q9R0P9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Uchl1Q9R0P9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Uchl1Q9R0P9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uchl1Q9R0P9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uchl1Q9R0P9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uchl1Q9R0P9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Uchl1Q9R0P9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uchl1Q9R0P9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uchl1Q9R0P9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uchl1Q9R0P9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uchl1Q9R0P9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Uchl1Q9R0P9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uchl1Q9R0P9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uchl1Q9R0P9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Uchl1Q9R0P9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Uchl1Q9R0P9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uchl1Q9R0P9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uchl1Q9R0P9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.11■□□□□ 0.17
Uchl1Q9R0P9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uchl1Q9R0P9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Uchl1Q9R0P9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uchl1Q9R0P9 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uchl1Q9R0P9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uchl1Q9R0P9 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.11■□□□□ 0.17
Uchl1Q9R0P9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Uchl1Q9R0P9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Uchl1Q9R0P9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Uchl1Q9R0P9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Uchl1Q9R0P9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Uchl1Q9R0P9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.1■□□□□ 0.17
Uchl1Q9R0P9 Gm15546-201ENSMUST00000122095 826 ntBASIC16.1■□□□□ 0.17
Uchl1Q9R0P9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Uchl1Q9R0P9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Uchl1Q9R0P9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Uchl1Q9R0P9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Uchl1Q9R0P9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Uchl1Q9R0P9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Uchl1Q9R0P9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Uchl1Q9R0P9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Uchl1Q9R0P9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Uchl1Q9R0P9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms