Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.89■□□□□ 0.13
Nubp1Q9R060 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nubp1Q9R060 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nubp1Q9R060 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.89■□□□□ 0.13
Nubp1Q9R060 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nubp1Q9R060 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nubp1Q9R060 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Nubp1Q9R060 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nubp1Q9R060 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nubp1Q9R060 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nubp1Q9R060 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nubp1Q9R060 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nubp1Q9R060 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nubp1Q9R060 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nubp1Q9R060 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nubp1Q9R060 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nubp1Q9R060 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Nubp1Q9R060 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nubp1Q9R060 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Nubp1Q9R060 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nubp1Q9R060 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nubp1Q9R060 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nubp1Q9R060 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nubp1Q9R060 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nubp1Q9R060 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nubp1Q9R060 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nubp1Q9R060 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nubp1Q9R060 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nubp1Q9R060 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.88■□□□□ 0.13
Nubp1Q9R060 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.88■□□□□ 0.13
Nubp1Q9R060 Gm32390-201ENSMUST00000212713 1172 ntBASIC15.88■□□□□ 0.13
Nubp1Q9R060 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.88■□□□□ 0.13
Nubp1Q9R060 Odf3b-204ENSMUST00000227834 930 ntBASIC15.88■□□□□ 0.13
Nubp1Q9R060 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nubp1Q9R060 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nubp1Q9R060 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nubp1Q9R060 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nubp1Q9R060 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nubp1Q9R060 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nubp1Q9R060 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nubp1Q9R060 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nubp1Q9R060 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Nubp1Q9R060 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nubp1Q9R060 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.87■□□□□ 0.13
Nubp1Q9R060 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Nubp1Q9R060 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.87■□□□□ 0.13
Nubp1Q9R060 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nubp1Q9R060 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Nubp1Q9R060 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nubp1Q9R060 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Nubp1Q9R060 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Nubp1Q9R060 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nubp1Q9R060 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.87■□□□□ 0.13
Nubp1Q9R060 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.87■□□□□ 0.13
Nubp1Q9R060 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nubp1Q9R060 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nubp1Q9R060 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.87■□□□□ 0.13
Nubp1Q9R060 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Nubp1Q9R060 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nubp1Q9R060 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nubp1Q9R060 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.86■□□□□ 0.13
Nubp1Q9R060 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.86■□□□□ 0.13
Nubp1Q9R060 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nubp1Q9R060 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nubp1Q9R060 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Nubp1Q9R060 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nubp1Q9R060 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nubp1Q9R060 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nubp1Q9R060 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nubp1Q9R060 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nubp1Q9R060 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nubp1Q9R060 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.86■□□□□ 0.13
Nubp1Q9R060 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.86■□□□□ 0.13
Nubp1Q9R060 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.86■□□□□ 0.13
Nubp1Q9R060 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.86■□□□□ 0.13
Nubp1Q9R060 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nubp1Q9R060 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nubp1Q9R060 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nubp1Q9R060 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.86■□□□□ 0.13
Nubp1Q9R060 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.86■□□□□ 0.13
Nubp1Q9R060 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nubp1Q9R060 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nubp1Q9R060 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Nubp1Q9R060 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nubp1Q9R060 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nubp1Q9R060 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.85■□□□□ 0.13
Nubp1Q9R060 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Nubp1Q9R060 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Nubp1Q9R060 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Nubp1Q9R060 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Nubp1Q9R060 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Nubp1Q9R060 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Nubp1Q9R060 Gm43371-201ENSMUST00000202838 1031 ntBASIC15.85■□□□□ 0.13
Nubp1Q9R060 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nubp1Q9R060 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nubp1Q9R060 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nubp1Q9R060 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.85■□□□□ 0.13
Nubp1Q9R060 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Nubp1Q9R060 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.85■□□□□ 0.13
Nubp1Q9R060 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms