Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shroom3Q9QXN0 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shroom3Q9QXN0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shroom3Q9QXN0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shroom3Q9QXN0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shroom3Q9QXN0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shroom3Q9QXN0 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.34■□□□□ 0.53
Shroom3Q9QXN0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shroom3Q9QXN0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shroom3Q9QXN0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shroom3Q9QXN0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Shroom3Q9QXN0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Shroom3Q9QXN0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Shroom3Q9QXN0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Shroom3Q9QXN0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Shroom3Q9QXN0 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Shroom3Q9QXN0 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.33■□□□□ 0.53
Shroom3Q9QXN0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Shroom3Q9QXN0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Shroom3Q9QXN0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.33■□□□□ 0.52
Shroom3Q9QXN0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shroom3Q9QXN0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shroom3Q9QXN0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.33■□□□□ 0.52
Shroom3Q9QXN0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shroom3Q9QXN0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shroom3Q9QXN0 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shroom3Q9QXN0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shroom3Q9QXN0 Gm27275-201ENSMUST00000184318 272 ntBASIC18.33■□□□□ 0.52
Shroom3Q9QXN0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.33■□□□□ 0.52
Shroom3Q9QXN0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shroom3Q9QXN0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shroom3Q9QXN0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shroom3Q9QXN0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shroom3Q9QXN0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Shroom3Q9QXN0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.32■□□□□ 0.52
Shroom3Q9QXN0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Shroom3Q9QXN0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shroom3Q9QXN0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Shroom3Q9QXN0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shroom3Q9QXN0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Shroom3Q9QXN0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Shroom3Q9QXN0 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Shroom3Q9QXN0 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Shroom3Q9QXN0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shroom3Q9QXN0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Shroom3Q9QXN0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shroom3Q9QXN0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Shroom3Q9QXN0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shroom3Q9QXN0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shroom3Q9QXN0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shroom3Q9QXN0 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shroom3Q9QXN0 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.31■□□□□ 0.52
Shroom3Q9QXN0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shroom3Q9QXN0 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.31■□□□□ 0.52
Shroom3Q9QXN0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shroom3Q9QXN0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.31■□□□□ 0.52
Shroom3Q9QXN0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Shroom3Q9QXN0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.31■□□□□ 0.52
Shroom3Q9QXN0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shroom3Q9QXN0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shroom3Q9QXN0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shroom3Q9QXN0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.3■□□□□ 0.52
Shroom3Q9QXN0 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
Shroom3Q9QXN0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.3■□□□□ 0.52
Shroom3Q9QXN0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shroom3Q9QXN0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shroom3Q9QXN0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shroom3Q9QXN0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shroom3Q9QXN0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.3■□□□□ 0.52
Shroom3Q9QXN0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.3■□□□□ 0.52
Shroom3Q9QXN0 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.3■□□□□ 0.52
Shroom3Q9QXN0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shroom3Q9QXN0 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Shroom3Q9QXN0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shroom3Q9QXN0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Shroom3Q9QXN0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shroom3Q9QXN0 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Shroom3Q9QXN0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Shroom3Q9QXN0 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.29■□□□□ 0.52
Shroom3Q9QXN0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shroom3Q9QXN0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shroom3Q9QXN0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Shroom3Q9QXN0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Shroom3Q9QXN0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shroom3Q9QXN0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shroom3Q9QXN0 Gm5643-201ENSMUST00000117081 966 ntBASIC18.28■□□□□ 0.52
Shroom3Q9QXN0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Shroom3Q9QXN0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shroom3Q9QXN0 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.28■□□□□ 0.52
Shroom3Q9QXN0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shroom3Q9QXN0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shroom3Q9QXN0 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shroom3Q9QXN0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shroom3Q9QXN0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Shroom3Q9QXN0 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Shroom3Q9QXN0 Mir6982-201ENSMUST00000184354 68 ntBASIC18.28■□□□□ 0.52
Shroom3Q9QXN0 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.28■□□□□ 0.52
Shroom3Q9QXN0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Shroom3Q9QXN0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Shroom3Q9QXN0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms